Dickeya aquatica: DAQ1742_00702
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Entry
DAQ1742_00702 CDS
T06021
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
daq
Dickeya aquatica
Pathway
daq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
daq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DAQ1742_00702 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
daq03019
]
DAQ1742_00702 (pnp)
03016 Transfer RNA biogenesis [BR:
daq03016
]
DAQ1742_00702 (pnp)
Enzymes [BR:
daq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
DAQ1742_00702 (pnp)
Messenger RNA biogenesis [BR:
daq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DAQ1742_00702 (pnp)
Transfer RNA biogenesis [BR:
daq03016
]
Prokaryotic type
tRNA degradation factors
DAQ1742_00702 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
S1_2
KH_2
OB_RRP5_4th
S1_RRP5
aRib
KH-I_KHDC4-BBP
KH_SLS1_2
Motif
Other DBs
NCBI-ProteinID:
SLM61783
UniProt:
A0A375A6Y5
LinkDB
All DBs
Position
702181..704301
Genome browser
AA seq
706 aa
AA seq
DB search
MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGAKNAKPGQDFFPLT
VNYQERTYAAGRIPGGFFRREGRPSEGETLTSRLIDRPIRPLFPDGFVNEVQVIATVVSV
NPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQYVLNPTSEELKTSRLDLVVA
GTEGAVLMVESEADLLSEDQMLGAVVFGHDQQQIVIENIKALTAEAGKPKWDWQAPAVNV
ELHNRVQALSEARLGDAYRIIEKQERYAQVDVIKSDVVAALLAEDETLDENELRDILGSI
EKNVVRSRVLRGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTER
DAQNIDELMGERTDRFLLHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPKPEA
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEGDNYVVLSD
ILGDEDHLGDMDFKVAGSREGVTALQMDIKIEGITREIMQVALNQAKGARLHILGVMEQA
ISIPRGEISEFAPRIHTIKISTDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAST
DGDKARLAIRRIEEITAEIEVGRIYQGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRIE
KVTDYLQMGQEVPVKVLEVDRQGRVRLSIKEATAQSQETVPVSSEE
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
ttgcttaatccgatcgttcgtaaattccagtacggccaacataccgttacgctggaaacc
ggtatgatggctcgtcaggccactgccgctgtcatggttagcatggatgacactgccgta
tttgttaccgttgtgggcgcgaaaaatgccaagccgggtcaggacttcttcccgctgacc
gttaactatcaagagcgtacttacgcagctggccgtatccccggtggtttcttccgtcgt
gaaggccgcccgagcgaaggcgaaacgctgacttcgcgtctgattgaccgcccgatccgc
ccgctgttcccagacggttttgtcaatgaagtacaggtgattgccaccgtcgtttccgtt
aacccgcaggttaacccggatatcgtggcgatgattggtgcttctgctgcgctgagcctg
tctggcattccgttcaatggcccgattggtgcggcacgcgttgggtatatcaacgatcag
tacgtactgaacccgaccagcgaagagctgaaaaccagccgtctggatctggtagtggcc
ggtactgaaggtgcggtgctgatggtggaatctgaagcggatctgctcagtgaagatcag
atgctgggggcggtggtgtttggtcacgaccagcagcagatcgtcatcgaaaatatcaaa
gcactgaccgcagaagccggtaaaccgaaatgggactggcaagctcctgctgtgaatgtg
gaattgcataaccgcgtgcaggcgttgtccgaagcccgtctgggcgatgcttatcgcatc
attgaaaagcaagagcgttatgctcaggttgatgtgattaaatctgatgtcgttgcggca
ctgctggctgaagatgaaacgctggacgaaaatgaactgcgtgacattctcggcagcatt
gagaaaaacgtggtacgtagccgcgtgctgcgtggtgagccacgcattgatggccgcgaa
aaagacatgatccgtggtctggacgtgcgcaccggcgtgctgccgcgtactcatggctct
gcactgtttactcgtggtgaaacacaggcgctggtgacggcgacgctgggtaccgagcgt
gatgcgcagaacattgatgaactgatgggtgaacgtaccgatcgtttcctgctgcattac
aacttcccgccgtactctgtgggcgaaaccggcatggtaggttcaccgaaacgccgtgaa
attggtcatggccgcctggcgaaacgtggcgtgctggccgtgatgccgaaaccagaagcc
ttcccgtacaccgtgcgtgtggtgtctgaaatcactgaatctaacggctcttcttccatg
gcgtccgtgtgcggtgcttctctggcgctgatggatgctggcgtgcctatcaaggctgcc
gtcgcgggtattgcgatgggtctggtaaaagaaggcgacaactacgttgtgctgtctgac
atcctcggcgatgaagaccacctcggcgatatggactttaaagttgccggtagtcgtgaa
ggcgttaccgccttgcagatggacatcaaaatcgaagggatcacccgcgagatcatgcaa
gtggcactcaatcaggcaaaaggggcgcgtttgcacatcctgggcgtgatggagcaggct
atcagcattccgcgtggtgaaatctctgagttcgctccgcgtatccacacgattaagatc
agcactgacaagatcaaagatgtgatcggtaaaggtggctcggttatccgtgcgctgacc
gaagaaactggtaccaccatcgaaattgaagatgatggtacggtgaagattgcgtctact
gatggcgataaagcccgcctggcgatccgtcgcatcgaagaaatcaccgctgaaatcgaa
gtgggtcgtatttaccagggtaaagtgacccgcattgttgatttcggtgcatttgtggcg
atcggtggcggtaaagaagggctggtacacatttctcaaattgcggacaagcgtattgag
aaagtgaccgactacttgcagatgggccaggaagtaccggtcaaagtgctggaagtagac
cgtcaggggcgtgtccgtttgagcataaaagaagcaactgctcaatctcaggaaactgtt
ccggtttccagtgaagaataa
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