Dickeya aquatica: DAQ1742_01052
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Entry
DAQ1742_01052 CDS
T06021
Symbol
rnc
Name
(GenBank) Ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
daq
Dickeya aquatica
Pathway
daq03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
daq00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
DAQ1742_01052 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
daq03019
]
DAQ1742_01052 (rnc)
03009 Ribosome biogenesis [BR:
daq03009
]
DAQ1742_01052 (rnc)
03036 Chromosome and associated proteins [BR:
daq03036
]
DAQ1742_01052 (rnc)
Enzymes [BR:
daq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
DAQ1742_01052 (rnc)
Messenger RNA biogenesis [BR:
daq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DAQ1742_01052 (rnc)
Ribosome biogenesis [BR:
daq03009
]
Eukaryotic type
90S particles
RNase
DAQ1742_01052 (rnc)
Prokaryotic type
rRNA processing factors
DAQ1742_01052 (rnc)
Chromosome and associated proteins [BR:
daq03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
DAQ1742_01052 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DSRM_2
RM44_endonuclase
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
SLM62078
UniProt:
A0A375A7I5
LinkDB
All DBs
Position
1043218..1043898
Genome browser
AA seq
226 aa
AA seq
DB search
MNPILINRLQKKLGYTFQQYDLLLQALTHRSASSKHNERLEFLGDSILSFVIANALYHRF
PRVDEGDMSRMRATLVRGNTLAEIAREFELGECLRLGPGELKSGGFRRESILADTVEALI
GGVFLDSNIQTVERMILQWYQTRLDEISPGDKQKDPKTRLQEFLQGRHLPLPTYLVVQVR
GEAHDQEFTIHCQVSGVSEPVVGTGSSRRKAEQAAAEQALKKLELE
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccatcctgataaatcgtttacaaaaaaaactgggctatactttccaacaatat
gatcttttattgcaggcactgacacaccgtagcgccagtagtaaacataatgaacggctg
gagttccttggtgattccatcctgagttttgtcatagccaatgcgttgtaccatcgtttc
ccccgcgttgatgaaggcgatatgagccggatgcgcgcgaccctggtgcggggaaataca
ctggctgaaattgcccgtgaattcgaactgggagaatgcctgcgtcttggccccggcgaa
ttaaaaagcgggggattccggcgcgagtctattttggcggataccgttgaagcactgatt
ggcggggtatttctggatagtaatattcagaccgtcgagcgaatgattttgcaatggtat
caaacccgtctggatgaaatcagcccaggggataaacaaaaagatccgaaaacgcgtttg
caggaatttctgcaaggacgccatctgccgttacctacttacttagtcgtgcaggtgcgt
ggtgaggcgcacgatcaggaatttaccattcattgccaggtcagcggggttagcgagccg
gtagtgggtaccgggtcaagccgtcgtaaagctgaacaggctgcggcggaacaggccctg
aaaaagctggagcttgaatga
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