Dickeya aquatica: DAQ1742_01076
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Entry
DAQ1742_01076 CDS
T06021
Symbol
pelD
Name
(GenBank) Pectate lyase precursor
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
daq
Dickeya aquatica
Pathway
daq00040
Pentose and glucuronate interconversions
daq01100
Metabolic pathways
daq02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
daq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
DAQ1742_01076 (pelD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DAQ1742_01076 (pelD)
Enzymes [BR:
daq01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
DAQ1742_01076 (pelD)
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
SLM62099
UniProt:
A0A375A8Y5
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Position
complement(1069487..1070650)
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AA seq
387 aa
AA seq
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MKNTRVHSIGTKSLLAAVVTAALMTSTAYAAGETDAATTGWATQNGGTTGGAKATAAKAI
EVKNIADFKKALNGTDASPKIIKVTGPIDISGGKAYTDTTDQKTRSQISIPSNTTIIGVG
SNGKFTNGSLVIKGVSNVILRNLYIETPVDIAPKYETGDGWNAEWDAAVIDSSTNVWVDH
VTISDGSFTDDKYTTKNGEKYVQHDGALDIKKGSDYVTVSNSRFELHDKTILIGHSDGNG
AQDSGKLHVTFHNNVFDRVTERTPRVRFGSIHAYNNVYLGDVKHSVYPYLYSFGLGTSGS
ILSESNSFTLANLKSIDGQNPECSIVKSFNSKVFSDKGSLVNGSTTTKLDTCGLTAYKPT
LPYKYSAQTMTTSLANSIVSSAGYGKL
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacacgcgtgtacattctatcggaaccaaaagtttactggccgctgttgtaaca
gctgcactgatgacctccaccgcttatgcagcaggggaaaccgatgctgcaaccactggc
tgggccacacaaaacggcggcaccaccgggggtgcaaaagcaacagcagccaaagccatt
gaagtaaaaaatatcgccgactttaaaaaagcgctgaacgggactgatgcgtcacccaaa
atcatcaaagtcacagggccgattgatatcagcggcggtaaggcttacaccgatacgaca
gatcagaaaacccgtagtcagatcagcattccttccaataccaccattatcggtgttggc
agcaatggtaaattcaccaacggttctctggttatcaaaggtgtgagcaacgttattctg
cgcaacctgtatattgaaacaccggtagatatcgcaccgaaatatgaaaccggtgacggc
tggaacgccgagtgggatgccgcggttatcgacagctccactaacgtttgggttgaccat
gtaaccatcagtgacggtagcttcactgatgacaaatacaccacaaaaaatggcgaaaaa
tacgttcagcatgacggcgcgctggatatcaaaaaaggctctgactatgtcaccgtctct
aacagccgctttgaactgcatgacaaaaccatcctgatcggccatagcgacggcaacggt
gcacaggactccggcaaactgcacgtgaccttccacaacaacgtgtttgaccgcgtgact
gaacgtaccccgcgtgtacgcttcggtagcatccatgcttacaacaacgtctatctgggt
gatgtgaagcacagtgtatacccgtacctgtacagcttcggtcttggcaccagcggcagc
attctgtctgaatctaactcatttacccttgctaatctgaagagcattgacggtcagaac
cctgagtgcagcatcgtgaaatccttcaacagtaaggtattctccgataaaggctctctg
gtgaatggttccacaaccaccaaactggatacctgtggcctgaccgcttacaaaccgact
ctgccatacaaatatagcgctcaaacgatgacgaccagcctggctaacagcatcgtcagc
agcgcaggttacggcaaactgtaa
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