Dickeya aquatica: DAQ1742_01954
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Entry
DAQ1742_01954 CDS
T06021
Symbol
recC
Name
(GenBank) Exodeoxyribonuclease V gamma chain
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
daq
Dickeya aquatica
Pathway
daq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
daq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DAQ1742_01954 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
daq03400
]
DAQ1742_01954 (recC)
Enzymes [BR:
daq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
DAQ1742_01954 (recC)
DNA repair and recombination proteins [BR:
daq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DAQ1742_01954 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
TetR_C_11
Motif
Other DBs
NCBI-ProteinID:
SLM62884
UniProt:
A0A375A9T8
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All DBs
Position
1971073..1974561
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AA seq
1162 aa
AA seq
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MSEQTLQPGLMVIHSNHPETLRDLLVSWMASHPLAGLENELILVQSNGIGQWLKLALARD
RQEGGCGIAAALDIQLPARFFWQVYRSVLGREQVPETSPFDKEQLIWRLMRLLPERLAED
DFAALAGFLRDDNDLRKLYQLAARLADLFDQYQVYRADWLADWADGRDVLTTSRHGTTPL
PEAQRWQPRLWRALLADTDAERAGTSRAALHRRFLDVVAQRIKAGLPPPSGLPARVVVFG
ISSMAQQALELLAALSHWCQVLMCVHNPCEHYWGDIIADKDLLRSWERRQARKPGTPRVI
TDEALHQHAHPLLAAWGKQGRDYIGLLDEYEQQAHTPGLMERVNLFISPGTDCLLNQLQD
DILDLRPAQESRQRWPAIDPQQDRSLCFHLAHSPQREVEVLHDQLLAAFAADPTLRPGEV
IVMVPDINAYAPHIQAVFGLIERGDPRYIPFSVADSGPRQNNLLLAALERLLHLPQSRVA
VSDVLDLLDVPALRRRFAISEAQLPLLQRWVRAANVRWGLHARQRQSLDLPEGAEQNSWF
FGLRRMLLGYAVGAGDAWHDIEPLDEIGGLDAVLAGQLALLLDRLDATWQQLSQPALASQ
WCERLRTLLATFFEAQEGEEGFMLLQLDDSLQRVGETCEAAGLQTPLPLSVVREHWLAMF
EHTSLTQPFFAGAVIFATLMPMRAIPFRHVCLLGMNDGDYPRTRVPLDFDLMGQDYRPGD
RSRREDDRYLFLEALLSARERLYISWVGRSIHDNSERPPSVLVAQLRDHLDSVWRSGDGQ
PLLAALTVEHRLQPFSAEYFSAGSPLFSYAREWRSGLAPAPVAGSCVPLPVYEHDGALTL
RQLADFVRDPVRQFFRLRLNVWFERDDPASLDQEPFVIDALDNWRLQHELIMAQKHAVQH
HQPREQALRSRLDSMVRRGELAPGGFTDVLVQDLAEPMADLFSRYEQAQAEWPQELADEA
LQVPLGGTLWLDDWLTELRADAQGNRCRLVLESSGLLHASRRSYRFERLLPFWVMHLAGH
LNGQPLHTTVVSKNGTVHLNALTPMQAETYWQALLTAWHAGMAAPLPLAVKTGFAWLEAG
GTPELAIDSDAGRAARACYDEHDPPARRAESVQNPYLARAFVDFDALWSEGAFARWVDPL
LAPLYHTLKAASAKKSSSRGQS
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaacagaccctgcaacccggcctgatggtcattcacagcaatcacccggaaacc
ctgcgcgacctgctggtgtcgtggatggcctcacatccgctggcagggcttgagaatgag
ctgattttggtacagagcaacggtatcggccaatggctgaagctggcgctggcgcgtgac
aggcaagagggcggctgcggtattgccgccgcgctcgatattcaactgcctgcccgtttt
ttctggcaggtttaccgcagcgtgctcgggcgtgagcaagtgccggaaacctcgccgttt
gataaagagcagttgatctggcgtttgatgcgcctgctgcctgagcggttagccgaagac
gattttgctgcactggccggttttctgcgtgatgataatgacttgcgcaaactttaccaa
ctggccgcacggctggcggatctgtttgaccagtatcaggtctaccgcgctgactggctc
gctgactgggccgacgggcgcgatgtgctgaccaccagccgacatggcaccacgccgctg
ccggaggcgcagcgctggcaaccgcggttgtggcgggcgctgctggccgataccgacgcg
gaacgtgcaggcaccagccgtgccgcgttgcaccgccgttttcttgatgtcgtggcgcaa
cgcataaaagccgggctgccacccccgtctgggttgcctgcgcgcgtggtggtgtttggc
atctcgtctatggcacaacaggcgctggaactcctggcggcactgagtcactggtgccag
gtattgatgtgtgtgcataacccgtgcgagcactattggggcgatatcatcgccgataaa
gacctgctgagaagctgggagcgccgtcaggcgcgcaaacccggcacgccgcgggtcatc
accgatgaggcattgcaccagcacgcccacccattgctggcagcctggggcaagcagggg
cgtgattatatcgggctgctggatgagtacgagcaacaggcgcacacaccggggctgatg
gagcgcgtcaatctgtttatcagccccggaacggactgcctgctcaaccagttgcaggat
gacatccttgatttgcgcccggcgcaggagagccgccagcgctggcccgcgattgacccg
cagcaagaccgctcgctctgttttcacctcgcccacagcccgcagcgtgaagtcgaagtg
ttgcatgaccagttgctcgccgcctttgccgccgacccgacgctgcgccccggcgaggtt
atcgtgatggtgccggacatcaacgcctatgcgccgcatattcaggcggtgtttgggttg
attgagcgcggcgacccgcgctatatcccgtttagtgtggccgacagcggcccgcgccag
aataacctgctgctggcggcgctggagcgcttgctgcatttgccgcaatcacgcgtggcg
gtcagcgacgtgctggatttactggatgtgcctgcgctgcgacgacgctttgccatcagc
gaggcccagttgccgctgttgcagcgctgggtgcgggcggccaatgtgcgctgggggctc
cacgcccggcagcggcaaagcctggatttaccggaaggggctgagcaaaacagctggttt
ttcggcctgcgccggatgttgctgggctatgccgtgggggcaggcgacgcctggcatgat
attgaaccgctcgatgaaatcggcgggctggatgcggtactggccgggcaactggcgctg
ttgctcgaccggctggatgccacctggcaacaattaagccagcccgcattggcctcgcaa
tggtgtgaacggctgcgcaccctgctggcgacgttttttgaggcacaggagggcgaagaa
ggcttcatgttgctgcaactggacgacagcctgcaacgcgttggcgaaacctgcgaggcc
gccgggctgcaaacgccgctgccgctgtcggtggtgcgtgagcactggctggcgatgttt
gagcacaccagcctgacgcagccgtttttcgccggagcagtgattttcgccaccctgatg
ccgatgcgcgccattccgtttcgccacgtctgcctgctgggcatgaatgacggcgattac
ccccgtacccgcgtgccgctggattttgacctgatgggccaggactaccgccccggcgac
cgctcccggcgtgaagatgaccgctatctgtttctcgaagcgctgctctcggcgcgcgag
cggctctacatcagttgggtcgggcgcagtattcacgataacagcgagcgcccgccttcg
gtgctggtggcgcaattgcgcgatcatctcgattctgtctggcgcagcggcgatggccag
ccgctgctggcggcgctgacggtggaacaccgcctgcaaccgtttagcgccgagtatttc
agtgcgggcagtccgctgtttagttatgcccgcgaatggcgcagcgggttagcgcccgcg
ccggtggctggctcgtgcgtgccgctgccggtatatgagcatgatggcgcgctgacgctg
cgtcagttggccgattttgtgcgtgacccggtgcggcagttctttcgcctgcgccttaac
gtctggtttgagcgggacgatccggcaagcctggatcaggaaccgtttgtgatagatgca
ctggataactggcgtttacagcatgagctgattatggcgcagaaacacgccgtccagcac
catcagccacgcgagcaggcgttacgctcgcgccttgacagcatggttcgccgcggcgag
ctcgcgcccggcggttttaccgacgtgctggtacaagacctcgccgagccgatggccgac
ctgtttagccgctatgagcaggcgcaggctgagtggccgcaggagttggccgatgaagcg
cttcaggtgccgctgggcgggacactgtggctggatgactggctgacggagttgcgtgcc
gatgcgcagggcaaccgttgccgtctggtgctggagagcagcgggttactgcacgccagc
cgccgcagttaccgttttgagcgcctgctgccgttctgggtgatgcatttggccgggcac
ctcaacgggcagccgctgcataccacggtggtgagcaagaatggtaccgtacacctgaat
gcgctgacgccgatgcaagcggaaacatactggcaggcgttactgactgcctggcacgcg
ggcatggctgcgccgctgccactggctgtgaaaaccgggtttgcctggctggaggcgggc
ggcacgccagagctggcaatagacagcgacgccggccgggccgcacgggcctgttatgac
gagcacgacccaccggcgcgccgggcggaatcggtacagaatccctatctggcacgcgcc
tttgtggattttgatgcgctgtggagcgagggggcatttgcccgctgggttgacccgcta
ctggctccgctctaccacacgctaaaagccgcgtcggcgaaaaaatcatcatcacgaggt
cagtcatga
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