Dickeya aquatica: DAQ1742_02022
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Entry
DAQ1742_02022 CDS
T06021
Symbol
rimO
Name
(GenBank) Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
daq
Dickeya aquatica
Brite
KEGG Orthology (KO) [BR:
daq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
daq03009
]
DAQ1742_02022 (rimO)
Enzymes [BR:
daq01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
DAQ1742_02022 (rimO)
Ribosome biogenesis [BR:
daq03009
]
Prokaryotic type
ribosomal protein modification factors
DAQ1742_02022 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
NTPase_1
CLP1_P
YajR_YAM
Methyltransf_2
Motif
Other DBs
NCBI-ProteinID:
SLM62943
UniProt:
A0A375AA62
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All DBs
Position
complement(2042524..2043930)
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AA seq
468 aa
AA seq
DB search
MTVNTFDPTQTTTLSAPQKALGEQPGSHSGKDASRKIGFVSLGCPKNLVDSERILTELRT
EGYEVVPSYNNADLVIVNTCGFIDSAVQESLEAIGEALNENGKVIVTGCLGAKENQIREV
HPKVLEITGPHSYEQVLSHVHHYVPKPEHNPFTSLVPAQGVKLTPRHYAYLKISEGCDHR
CTFCIIPSMRGDLDSRPIGSVLDEAKRLAEAGVKELLVISQDTSAYGADVKHRTGFWNGQ
PVKTSMVSLCEQLATLGLWVRLHYVYPYPHVDDVIPLMAQGKILPYLDIPLQHASPKILK
LMKRPGAVERTLERIKRWREICPDLTLRSTFIVGFPGETEEDFQMLLDFLQEARLDRVGC
FRYSPVEGARANELPDQVPEEVKEDRYHRFMQVQQQISSQRLQAKIGRTLTVLIDEVDDE
GAIGRSMADAPEIDGAVYLNGETAVNVGDWVTVKIEHADEYDLWGSRI
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgactgttaacaccttcgatccaacccaaaccaccaccttgtctgcaccgcaaaaggcc
cttggcgaacagcccggcagccatagcggcaaagacgcctctcgcaaaataggcttcgtc
agcctgggttgcccgaaaaatctggtggattcggagcgaatcctgacggaattacgcacc
gaagggtatgaggtggtgccgagctataataatgccgacctggtgattgttaacacctgc
ggttttatcgacagtgcggtacaagagtcgctggaagccattggtgaggcgctaaatgag
aacggtaaagtgattgtcaccggatgtcttggtgccaaagagaaccagattcgtgaagtg
cacccaaaagtgctggaaattaccggcccacacagttacgagcaggtactcagccacgtc
catcattatgtgccaaagcctgagcacaacccgttcaccagtctggttccggcacaaggc
gttaaactcaccccccgccactacgcctatctgaagatttccgaagggtgcgatcaccgt
tgcaccttctgcattattccgtcaatgcgtggtgatttggacagtcgccccatcggttcg
gtgctcgacgaggccaaacggctggccgaggccggagtcaaagagttgctggtgatttct
caggacacctccgcctacggtgctgacgtcaaacaccgtaccggcttctggaacggccag
ccggtaaaaaccagcatggtcagcctgtgtgaacagctcgccacactggggttatgggta
cgtctgcactacgtttatccttacccgcatgttgatgacgtgattccgctgatggcgcaa
ggcaaaatcctgccttatctggatattccactacagcatgccagcccgaaaatcctgaag
ctgatgaagcgaccgggagccgttgagcgcacgctcgagcgcatcaaacgctggcgggaa
atttgcccggatctgaccctgcgttcaacatttatcgtcggcttccccggtgaaaccgaa
gaggacttccagatgttgctggattttctgcaagaggcccggttagatcgtgtcggctgc
ttccgctatagcccggtagagggtgcccgcgccaatgaattaccggatcaagtgccggaa
gaggtaaaagaagatcgttaccaccgctttatgcaggtacagcagcagatctccagccag
cgtttgcaggcaaaaattggtcgcacgctgacggtgcttatcgatgaagtggatgacgaa
ggcgcgattggccgcagcatggctgatgcgccagaaatcgatggcgcagtttacctgaat
ggtgaaaccgctgtgaacgtgggcgattgggtcaccgtgaaaatcgaacacgctgacgaa
tacgacctgtggggctcacggatctaa
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