Dickeya aquatica: DAQ1742_02069
Help
Entry
DAQ1742_02069 CDS
T06021
Symbol
rarA
Name
(GenBank) Replication-associated recombination, DNA-dependent ATPase involved in processing recombination intermediates. RarA works at replication forks affecting dimer formation
KO
K07478
putative ATPase
Organism
daq
Dickeya aquatica
Brite
KEGG Orthology (KO) [BR:
daq00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
DAQ1742_02069 (rarA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MgsA_C
AAA_assoc_2
AAA
RuvB_N
AAA_5
Mg_chelatase
AAA_16
AAA_22
nSTAND3
Sigma54_activat
AAA_30
AAA_19
AAA_14
Sigma54_activ_2
ResIII
AAA_3
ABC_tran
AAA_24
AAA_28
Parvo_NS1
NPHP3_N
DUF815
Cdc6_lid
ATP-synt_ab
AAA_25
AAA_33
NACHT
AAA_11
AAA_18
RNA_helicase
AAA_2
DNA_pol3_delta2
IstB_IS21
Resolvase
NTPase_1
AAA_17
cobW
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
SLM62984
UniProt:
A0A375AA40
LinkDB
All DBs
Position
2089760..2091094
Genome browser
AA seq
444 aa
AA seq
DB search
MSLDFSNNAFQPLAARMRPVQLSQYIGQQHLLGPGKPLPRAIEAGQLHSMILWGPPGTGK
TTLAELIAHYAQADVERLSAVTSGIKEIREAIERARQSRDVGRRTMLFVDEVHRFNKSQQ
DAFLPHIENGTITFIGATTENPSFELNSALLSRARVYLLKALSADDIEQVLIQALDDKAR
GLGGQQIILPPETRRLLAELVNGDARRSLNLLEMMADMAEVAADGQRVLTSALLNEVSGE
RSARFDNKGDRYYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRLLAIASEDV
GNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAAMRDAREK
PDYDVPAHLRNAPTHLMKEMGLGAEYRYAHDEPNAYAAGEIYFPPEMAQTHYYQPTSRGL
EAKIGEKLAWLAAQDQNSPTKRYR
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
ttgtcactcgatttttccaataacgcgtttcagcctctggctgcgcgtatgcgcccggtt
cagttatctcaatatattggccaacagcatttgctggggccgggaaaaccgttaccgcga
gcaatcgaggcaggccagttacactcgatgattttatggggccctccgggaacggggaaa
acaacgttagctgagttgattgcacattatgctcaggctgatgtcgaacgcctgtctgcc
gtgacctccggtattaaagaaatccgcgaagccattgaaagagcccggcaaagccgggac
gtcgggcggcggaccatgctgtttgtggatgaagtgcatcgctttaataaaagccagcag
gatgcgtttttaccgcatatcgaaaacgggacgattacgtttattggcgcgacaaccgag
aacccgtcgtttgaactcaattcggcgctgttgtcgcgcgcgcgggtgtatctgttaaaa
gcgctgagcgcggatgatattgagcaggtactcatacaggcgctggatgataaagcgcgc
ggcctgggcgggcagcagatcattttgccgccggaaacccggcgattgctggctgaactg
gtcaatggtgatgcccgtcgctcgctcaatttgcttgaaatgatggcggatatggcagag
gtggcggccgatggtcagcgggtgttgacgtcagcgttgctcaacgaggtttccggcgag
cgcagtgcccgttttgataacaaaggcgatcgctattacgatcttatctctgcactgcat
aaatcggtacgtggctcggcccccgatgcggcgttgtactggtatgctcgcatcattacg
gctggcggcgacccgctttatgtcgcccgccgattattggcgatagcttcagaggatgtc
ggcaatgctgaccctcgggcgatgcaagtcgctatcgccgcctgggactgctttacccgt
gtcgggcctgctgaaggtgagcgggccatcgctcaggcgatcgtttatctggcgtgtgcc
ccgaaaagcaatgctgtgtacaccgcgtttaaggcggcaatgcgcgatgcgagagaaaaa
cctgattatgatgtgcccgctcatcttcgcaatgcgcccactcacctgatgaaagagatg
gggctaggcgctgaatatcgctatgcgcacgatgagccaaatgcgtatgcggctggagaa
atctattttccgccggaaatggcgcaaacccattactatcagccgacatcccgcgggctg
gaagccaaaatcggtgaaaagctcgcctggctggctgctcaggatcaaaatagcccgaca
aaacgctaccgctag
DBGET
integrated database retrieval system
