Dickeya aquatica: DAQ1742_02116
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Entry
DAQ1742_02116 CDS
T06021
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
daq
Dickeya aquatica
Pathway
daq00541
Biosynthesis of various nucleotide sugars
daq01100
Metabolic pathways
daq01250
Biosynthesis of nucleotide sugars
Module
daq_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
daq00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
DAQ1742_02116 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
daq01005
]
DAQ1742_02116 (kdsB)
Enzymes [BR:
daq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
DAQ1742_02116 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
daq01005
]
Lipid A
DAQ1742_02116 (kdsB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
DUF2064
DacZ_P
Motif
Other DBs
NCBI-ProteinID:
SLM63027
UniProt:
A0A375AAM6
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All DBs
Position
2140595..2141344
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AA seq
249 aa
AA seq
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MTFTAIIPARYASTRLPGKPLADIHGKPMVVHVMERARESGASRVIVATDHADVARAIEQ
AGGEVCMTRPEHSSGTERLAEVIEHYGFADEEIVVNVQGDEPLIPPVIIRQVADNLAGSV
AGMATLAVPITGSEEAFNPNAVKVVTDAQGYALYFSRATIPWERDRFAQSCETIGNHFLR
HIGIYAYRAGFIRRYVSWAPSELEKIEMLEQLRVLWYGEKIHVAVAKEVPSVGVDTPEDL
ARVRVMMAV
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgacctttaccgcaattattccagcccgctatgcgtcaacccggttgccgggaaaaccg
ctggcggatattcatggtaaaccgatggtggtgcacgtcatggagcgtgcacgagaatcg
ggtgcgagtcgggtgattgtggccaccgatcatgcggatgttgcgcgagccattgagcag
gctggcggcgaggtctgcatgacgcgccctgaacacagttccggcacagagcgtctggct
gaggtcatcgagcattacggctttgctgatgaagagattgtcgtcaacgtgcagggtgac
gagccgctgataccgccggtgattatccgccaggtggcggacaatctggccggtagtgtc
gcagggatggcgacactggccgtcccgataaccggcagcgaagaggcgttcaaccccaat
gcggtgaaagtggtcacggatgcgcaaggttatgcgctctatttttcccgtgccaccatc
ccctgggagcgagatcgttttgcgcaatcttgcgaaactatcggaaatcacttcctgcgc
catattggcatttacgcttatcgtgccggttttattcgtcgctacgtcagttgggctccc
agtgagctagaaaaaatcgaaatgctcgagcaattgcgagtgctgtggtacggcgagaag
atccatgttgcggtagcgaaagaagtgcccagcgtcggcgtggataccccggaagatttg
gcgcgagtcagggtaatgatggcggtgtaa
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