Dickeya aquatica: DAQ1742_02511
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Entry
DAQ1742_02511 CDS
T06021
Name
(GenBank) Transcriptional regulator GabR of GABA utilization (GntR family with aminotransferase-like domain)
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
daq
Dickeya aquatica
Brite
KEGG Orthology (KO) [BR:
daq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
daq03000
]
DAQ1742_02511
Transcription factors [BR:
daq03000
]
Prokaryotic type
Helix-turn-helix
GntR family
DAQ1742_02511
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
HTH_24
HTH_Crp_2
Beta_elim_lyase
HTH_41
HTH_11
Rrf2
DnaD_N
HTH_46
MarR_2
HTH_36
RPA_C
Motif
Other DBs
NCBI-ProteinID:
SLM63390
UniProt:
A0A375ABF4
LinkDB
All DBs
Position
2540168..2541661
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AA seq
497 aa
AA seq
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MRSLLTDLLLQGLEQQQEGTLNKRLYDSIRLAILAGDISPGQRLPSSRDLAQQLSLSRNT
VMAAFEQLLAEGYIETRTGSGSYVTEQLPDPRLPDVRTETPLPVRPAAQELSRRGKHLLG
YAGASARQWGAFMPGIPDINSFPHALWRRLQTRLARRVKPEQLSYSPMGGCPELQQSLVD
YLRVARSVTCTAEQILITEGTHQAMDLLSKMLCNPGDVAWIEDPCYWGMRNVLTINGLRV
SPVSVDEQGMVPPEQVDASAAPRLICVTPSHQYPLGAVMSLARRQRLLALAQEHNGWIIE
DDYDSEFRFSGSPIPALQGLQTQPPVIYIGTFSKTLYPGLRVSYMVLPPPLARELKVAHA
ELYRGGHWLTQLTLSQFIGEGHYAAHIRRMRLLYARRRALLSELIVQHLGQDYLGYNSNA
GLHLILKLPEMVDDVLLAARIVQRGVMVKPLSSYYLRPVPERGLLLGYACVEEHEMALAF
NVILACLHAPETATRLP
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
ttgcgctcacttctgaccgatttactgttacaagggctggagcaacagcaggaaggcacg
ctgaacaagcgcctttacgacagcatccggctggcgattctggccggagatatcagcccc
ggccagcgcctgccctcctcgcgtgacctggcgcagcagctttcactgtctcgcaatacc
gtgatggcggcgtttgagcaactgctggcggaaggttacatcgaaacccgcaccggcagc
ggcagctacgttaccgagcaattgcccgaccctcgtctgccggatgtgcgcactgaaaca
ccgttaccggtgcgcccggccgcacaggagttatcacgccggggaaaacacctgctgggg
tacgccggggcatcggcacgccagtggggggcgtttatgccgggcattcccgatatcaac
agcttcccccatgcgctgtggcggcggctgcaaacccggctcgcccggcgtgtgaaaccg
gaacagttgtcttactcaccgatgggcggctgcccggaactccagcaatcgctggtagac
tacctgcgcgtcgcccgctccgttacctgtactgccgagcagattctgataaccgaaggc
acccatcaggcgatggatctgctgtcgaaaatgctgtgcaaccccggcgatgtggcctgg
attgaagacccatgctattggggaatgcgcaatgtgctgaccatcaacgggctgcgcgtg
tcccctgtcagcgttgatgagcaaggcatggtgccaccggagcaggttgatgccagcgcc
gcccccaggctgatttgcgtgacgccgtcgcaccagtacccgctgggtgcggtgatgagc
cttgcgcgccgtcagcgtctgctggcgctggcacaagagcacaatggctggataatcgaa
gatgattatgacagtgaatttcgcttctccggcagcccgatcccggcgctacaaggcctg
caaacccagccgccggttatttatatcggtacatttagcaagacgctctatccggggtta
cgggtcagctacatggtgctgccgcctccgctggcgcgagagctgaaagtggcccacgcc
gagctgtatcgcggcggccactggctgacacaactgacgctaagccaattcattggtgaa
gggcactatgccgcccacatccggcgtatgcgcttgctctacgcgcgccgacgcgcgctg
ctcagtgaactgattgtgcagcatctcggccaagactaccttggctacaacagcaatgcc
gggctgcacctgattttaaagctgccggaaatggtagatgatgtgctgctcgccgcccgc
attgtgcagcgcggcgtgatggtcaaacccctttccagctactatctgcgcccggttcca
gaacgtggtttgctgctcgggtatgcctgtgttgaagagcatgaaatggcgctggcattc
aacgtcattctggcctgcctgcacgcgccagaaaccgccacccggttgccctga
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