Dickeya aquatica: DAQ1742_03112
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Entry
DAQ1742_03112 CDS
T06021
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
daq
Dickeya aquatica
Brite
KEGG Orthology (KO) [BR:
daq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
daq03032
]
DAQ1742_03112 (gyrA)
03400 DNA repair and recombination proteins [BR:
daq03400
]
DAQ1742_03112 (gyrA)
Enzymes [BR:
daq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
DAQ1742_03112 (gyrA)
DNA replication proteins [BR:
daq03032
]
Prokaryotic type
DNA Topoisomerases
DAQ1742_03112 (gyrA)
DNA repair and recombination proteins [BR:
daq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DAQ1742_03112 (gyrA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-ProteinID:
SLM63938
UniProt:
A0A375ACV5
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Position
complement(3112573..3115206)
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AA seq
877 aa
AA seq
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MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMSVLGNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM
RYTEVRMSKIAHELLADLEKETVDFVPNYDGTEQIPDVMPTRIPNLLVNGSSGIAVGMAT
NIPPHNLSEVINGCLAYIDDENISIEGLMTHIPGPDFPTAAIINGKRGIEEAYRTGRGKV
YIRARAEVEADAKSGRETIIVHEIPYQVNKARLIEKIAELVKEKRIEGISALRDESDKDG
MRIVIEIKRDAVGEVVLNHLYSQTQMQVSFGINMVALHQGQPKLMTLKDILAAFVRHRRE
VVTRRTIFELRKARERAHILEGLAIALANIDPIIELIRHASTPAEAKAALVAQAWELGSV
AAMLEQAGDDAARPEWLEPEFGIHDGRYHLTEQQAQAILDLRLQKLTGLEHEKLIDEYKE
LLAQIAELLFILRSPERLMEVIREELVAIREQYSDSRRTEITHNSADINIEDLINEENVV
VTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSSRGRLY
WLKVYQLPEASRGARGRPIINLLPLEPDERITAILPVREYEEGMNVFMATASGTVKKTAL
TEFSRPRSAGIIAVGLNDGDELIGVDLTDGSNEVMLFSAEGKVVRFSESAVRTMGRTATG
VRGISLQNDDRVVSLIVPRGEGDILTVTQNGFGKRTAVSEYPTKSRATKGVISIKVSERN
GKVVGAVQVDSADQIMMITDAGTLVRTRVSEVSIVGRNTQGVTLIRTAEDEQVVGLQRVA
EPVEDDELDSVVPVDGDLPQEESDEPEADDDVPADDE
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacctagccagagaaattacaccggtcaacatcgaagaagagctgaaaagttca
tatctggattatgctatgtccgtcatcgtcgggcgcgcgttgccggatgttcgcgatggc
ctcaagccggtacaccgccgcgtactttacgcgatgagtgtgctggggaacgactggaac
aagccttataagaaatcggcccgtgtggtcggggacgttatcggtaaataccacccgcac
ggtgatagcgcggtgtatgacactatcgtgcgtatggcccagccattttcactgcgttac
atgctggtggacgggcagggcaacttcggttccatcgacggcgactccgccgcggcgatg
cgttataccgaagtgcgcatgtcaaaaattgcccacgaattactggccgatctggaaaaa
gagacggtggactttgtgccgaactacgatggcacagagcagatcccagacgtgatgcca
acccgcattccgaacctgctggtaaatggttcatcagggattgcggttggcatggctacc
aacattccgccccataacctgtctgaagtgattaacggctgtctggcctatattgatgat
gagaacatcagtattgaagggctgatgacgcatatccctggacccgatttcccgaccgct
gccatcatcaacggcaagcggggcattgaagaagcttaccgtactggccgtggcaaggtg
tatatccgtgcgcgcgcagaggtggaagcggatgcgaaatccggccgcgaaaccatcatc
gtgcatgaaatcccttatcaggtgaacaaagcacgcctgattgagaaaattgccgagctg
gtgaaagaaaaacgcattgaaggcatcagtgcgctgcgcgatgagtcagacaaagacggc
atgcgcatcgtgattgaaatcaagcgtgatgccgtcggcgaggtggtactgaaccacctc
tattcacagactcagatgcaggtttcctttggcatcaacatggtggcgctgcatcagggc
cagcctaagttgatgacgcttaaggatattctggcggcgtttgtgcgccaccgccgcgaa
gtggttacgcgccggacgatttttgaactgcgtaaagcgcgtgagcgagcccacattctg
gaagggctggcgattgcgctagctaacatcgaccccatcattgaactgatccgtcatgca
tcgactccggcagaggccaaagccgcgctggtggcacaggcatgggaactgggcagtgtg
gccgccatgctggagcaagccggtgacgatgcggctcgcccggaatggctggagccggaa
tttggtattcacgacggccgctatcacctcaccgagcagcaggctcaggcgattttggat
ctgcgtttgcagaaacttaccgggctggagcatgaaaagcttatcgatgagtataaagag
ctgctggcacagatagcggaactgctgtttattctgcgcagccccgagcgtctgatggag
gttatccgcgaggaactggtcgcgattcgtgagcagtacagcgattctcgtcgcaccgaa
atcacccataacagcgctgatatcaatatcgaagatctgatcaacgaagagaacgtggtg
gtgacgttatcgcatcagggctatgtgaaataccagccactgagtgattacgaggcccag
cgccgcggcggcaaaggcaagtcggccgcacgtatcaaagaagaagattttatcgaccgc
ctgttggtagcgaacacccacgataccattctgtgcttctccagccgtggccgcctctac
tggctgaaggtttatcaactgccggaagccagccgcggcgcgcgtggccgccccattatt
aacctgctgccacttgagccggacgagcgcatcaccgcgattctgccggtacgcgagtac
gaagaaggcatgaacgtctttatggcaaccgccagcggcacagtgaaaaagaccgcactg
accgagtttagccgcccgcgtagcgccgggattatcgccgttggtcttaatgacggtgat
gaactgattggtgtggatctaacggatggcagcaatgaggtgatgctgttctctgcggaa
ggtaaagtggtgcgtttttctgagtcggctgtgcgcaccatgggccgaacggcgaccggg
gtgcgaggcatcagcttgcaaaatgacgatcgcgtggtgtcgttgattgtgccgcgtggt
gaaggcgatattctgactgtcacgcagaatggttttggtaaacgtactgctgtgagcgag
tatccgaccaaatcccgcgccaccaaaggggttatctccatcaaggtcagcgagcgtaac
ggcaaggtggtgggggccgttcaggtcgattctgccgatcagataatgatgataaccgat
gccggtacgctggtgcgtacgcgtgtttctgaggtcagtatcgttgggcgtaacacgcaa
ggggtgacgctgattcgtaccgctgaagatgagcaggttgtcggtctgcaacgtgttgcc
gagccggtggaagatgatgagcttgacagcgtagtgccggttgatggcgacttgccgcaa
gaggagtctgatgagccagaagccgatgacgatgtccccgcagacgatgaataa
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