Dickeya aquatica: DAQ1742_03504
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Entry
DAQ1742_03504 CDS
T06021
Symbol
yfiF
Name
(GenBank) hypothetical tRNA/rRNA methyltransferase yfiF
KO
K03214
RNA methyltransferase, TrmH family [EC:2.1.1.-]
Organism
daq
Dickeya aquatica
Brite
KEGG Orthology (KO) [BR:
daq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
daq03009
]
DAQ1742_03504 (yfiF)
03016 Transfer RNA biogenesis [BR:
daq03016
]
DAQ1742_03504 (yfiF)
Ribosome biogenesis [BR:
daq03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DAQ1742_03504 (yfiF)
Transfer RNA biogenesis [BR:
daq03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
DAQ1742_03504 (yfiF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
SpoU_sub_bind
Motif
Other DBs
NCBI-ProteinID:
SLM64308
UniProt:
A0A375ADY6
LinkDB
All DBs
Position
complement(3512837..3513928)
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AA seq
363 aa
AA seq
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MSDALSGKGGKVRVMYVRSDDTADDKSSKTKRPADKRRGGEGENRSHHKGRDGGARGGRD
NAGGGAKWRGESDRRERPVRRDAADRVDSPWKTVSRPSDDTPDHGGISGKSQIDPEQLRR
QRTEETRVYGENACQALFLSRPESIVRGWFLQEVTPRFRETLRWMAANRKAYHVVDEDEL
TRASGTEHHGGVCFIIKKRRGLDVATYLKTAGETDCVLALEDVGNPHNLGGIVRSCAHFG
VNGVMVRDAAMLESGAAVRTAEGGAEHVKAINSDNLIEELAQFRAAGYTIVTTSSHKGSR
LSQVELPAKTVIVLGQEGDGLLDSTWQQGDMKISIDGTGKVESLNISVATGILLAQWWRQ
NHE
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatgcattaagtgggaaaggcggtaaggtccgtgtcatgtacgttcgcagtgac
gatactgcggacgataaaagcagtaaaacgaagcggcctgccgataaacgccgtggtggt
gaaggggaaaaccgttctcaccataaagggcgtgacggtggcgcgcgtggcggacgagat
aatgccggtggcggtgcgaagtggcgtggcgagtcagaccggcgtgagcgcccggtgcgt
cgtgatgccgccgaccgcgtggactctccgtggaagaccgtctcccgcccatcagatgac
acaccggatcacggtggcatcagcggcaaaagccagattgatcccgagcagttgcggcgt
cagcgcacggaagagacccgtgtctatggcgaaaatgcctgccaggcgctgtttttaagc
cgcccggagtcgattgttcgcggctggtttttgcaggaagtgaccccccgttttcgtgaa
acgctgcgctggatggccgcaaaccgcaaagcataccatgtggttgatgaagatgaactg
acccgggcatccggcactgaacatcacggtggcgtctgttttatcatcaaaaaacgccgt
ggcctggatgtcgccacgtacctgaaaaccgccggggaaaccgactgtgtgctggcgctt
gaagatgtcggcaacccgcataatctgggtggcattgtacgtagctgcgcgcattttggt
gtcaatggcgtgatggtgcgtgatgcggccatgctggagtctggcgcagccgtgcgtacg
gcagaaggcggagccgagcatgtaaaagccatcaattccgataacctgattgaggaattg
gcgcagttccgcgcggcaggatataccatcgttaccacctccagccacaaaggaagccgt
ttatcacaggtagaattaccggccaaaacggtgattgtgctcgggcaggaaggggatggc
ctgttagatagcacctggcagcagggcgatatgaaaatctccattgacggcaccggtaag
gtcgaaagcctgaatatttcagtcgcaaccggtattctgctggcgcaatggtggcggcag
aaccacgagtaa
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