Dickeya aquatica: DAQ1742_03527
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Entry
DAQ1742_03527 CDS
T06021
Symbol
truD
Name
(GenBank) tRNA pseudouridine 13 synthase
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
daq
Dickeya aquatica
Brite
KEGG Orthology (KO) [BR:
daq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
daq03016
]
DAQ1742_03527 (truD)
Enzymes [BR:
daq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
DAQ1742_03527 (truD)
Transfer RNA biogenesis [BR:
daq03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DAQ1742_03527 (truD)
Prokaryotic type
DAQ1742_03527 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
SLM64327
UniProt:
A0A375AE99
LinkDB
All DBs
Position
complement(3537216..3538274)
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AA seq
352 aa
AA seq
DB search
MVMTTDSLLWLYGKPQATGVLRASDDDFTVIEDLGFTPDGEGEHVLVRLRKRGCNTLFVA
EALAKFAGIAARSVSYAGLKDRHAVTEQWFCLHLPGKTDPEWSAFALEGCDILEAQRHRR
KVRIGALRGNAFRLVLRDISDRAEVSARLEQIANGGVPNYFGSQRFGRAGNNLEQARRWA
NNEIRVKERSKRSFYLSAVRSELFNRITSTRLENYGSTQVLIGDALQLAGRGSWFVANEE
ELPELQRRVSAGELLITAPLPGQNESGTQADALAFEQHCLDDQALLLSLLARERVESARR
AMMLYPRDIRSVWQDDATLELHFWLPSGCFATSVVRELLIAQEPDVEAMVAE
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atggtgatgacgactgattcgctgttgtggttatacggtaaaccgcaggcaactggcgtg
ttgcgcgcctcggacgatgattttacggttattgaagacctgggttttacgccagatggt
gagggtgaacatgtgcttgtcaggctgcgtaagcgcggctgtaatacgctgtttgtcgcc
gaggcgctggcaaagttcgcgggtattgcggcgcgttccgtcagctatgccggactgaaa
gaccgccatgctgttaccgagcagtggttttgcctgcatttgccgggtaaaacagacccg
gaatggtcagcgtttgcgctggagggatgtgacattcttgaggcccagcgccatcgccgt
aaagtgcggattggtgcgctgcgtggcaatgcattccggctggtgttacgcgatatcagt
gaccgggcagaagtctcggctcgtctggaacagatagccaacggcggcgttcccaattac
tttggcagccagcgttttgggcgagctggcaacaatctcgaacaggccagacgctgggcc
aataacgaaattcgcgtgaaagagcgcagtaaacgcagtttttatttatctgcggtgcgc
agtgaattgtttaatcgcattaccagtacacgtcttgaaaactatggctcgactcaggta
ttaatcggtgatgcgttgcaactggcagggcgggggagctggtttgttgccaacgaggaa
gagttacccgagttacagcggcgagtcagtgcgggtgaactgctgatcaccgcccccttg
cctggtcagaatgaatccggcacacaggctgatgcgctggcatttgagcagcactgtctg
gacgatcaggcgctgttgttatcactgttagcccgtgaacgcgtggagagcgcacgccgc
gccatgatgctttatccgcgtgatattcgcagtgtatggcaggatgatgccacgcttgag
ctgcatttctggttgccctccgggtgttttgccaccagcgtggtgcgggaattactcatc
gcccaagagccggatgttgaggcaatggtggcagagtga
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