Dickeya aquatica: DAQ1742_03854
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Entry
DAQ1742_03854 CDS
T06021
Symbol
rapA
Name
(GenBank) RNA polymerase associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
daq
Dickeya aquatica
Brite
KEGG Orthology (KO) [BR:
daq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
daq03021
]
DAQ1742_03854 (rapA)
Transcription machinery [BR:
daq03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
DAQ1742_03854 (rapA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Cas3-like_C_2
AAA_34
Flavi_DEAD
COG2_N
Motif
Other DBs
NCBI-ProteinID:
SLM64643
UniProt:
A0A375AEX8
LinkDB
All DBs
Position
3858707..3861610
Genome browser
AA seq
967 aa
AA seq
DB search
MPFTLGQRWISDTESDLGLGTVVAMDARMVTLLFPASGENRLYARNDAPITRVMFNPGDT
VTSHEGWQLQVDDIRDENGLRTYIGQRLDTQEAAELREVFLDSKLTFNKPQDRLFAGQID
RMDRFALRYRARLHQHAQALQPWGGLRGMRASLIPHQLYIAREVGQRHAPRVLLADEVGL
GKTIEAGMIIHQQLLAGRAERVLIVVPETLQHQWLVEMLRRFNLLFSLFDDERYAEARLD
SDNPFETEQLIICSLDFVRRNPSRFEQLQDAEWDLLVVDEAHHLAWSEAAPSAAYRAIEK
LAEVTPAVLLLTATPEQLGQESHFARLRLLDPDRFHDYQEFVAEQQHYRPVADAVSLLLG
GEPISDAQRNMLSDMLGEQDIEPLLKSIASEREDAISARQELIAMLMDRHGTSRVLFRNT
RQGVKGFPKRELHQIKLPLPTQYQTAMRVAGIMNARKSAEDCARDMLYPEQIYQQFEDDN
ATWWSFDPRVEWMLDFLTSHRDEKVLVICAKAATALQLEQVLRTREAIRAAVFHEGLSIL
ERDRAAAYFASAEDGAQVLICSEIGSEGRNFQFASHLIMFDLPFNPDLLEQRIGRLDRIG
QSRDIQIMVPYLENTAQALLVRWYHEGLDAFEHTCPTGRTIYDKHHEQLITLLAKPTETD
GLDELIHTCRQQHDQLKAQLEQGRDRLLELHSNGGEQAQALAAAIAEQDDDVGLVNFALN
LFDIIGIHQDDRSDNLIVLTPSEHMLVPDFPGLAQDGCTITFDREQSLSREDAQFVSWEH
PLIRNGLDLVLSGDTGSCAVSLLKNKALPVGTLLAELVYVVEAQAPKKLQLTRFLPPTPI
RVLLDRKGTNLATQVEFESFNRQLSAVNRHTSSKLVNAVQDDVHAMLQKAQPLVDAQAQV
LITEAKNRADAELRRELERLQALKAVNPNIRDDELEALEEQREQVLQNLQQANWRLDAIR
LVMVAHQ
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgccttttacacttggtcaacgctggataagcgacacagaaagcgatttgggattgggt
acggtagtggcgatggatgcccgtatggtgacgttgctgtttcccgccagcggcgaaaac
cgcctctatgccagaaatgacgcccccatcacccgcgtgatgttcaatcccggcgatacc
gtcaccagccatgagggctggcagttacaggttgacgatattcgtgacgagaatggcctg
cgtacctatatcggccagcggctggatacgcaagaagccgccgagctgcgcgaagtcttt
ttagacagcaaactcacctttaataagccgcaagaccggctgtttgccgggcagatagac
cggatggatcgctttgcgctgcgctatcgcgcccgtttgcaccagcacgcccaggcattg
cagccgtggggcggcctgcgcggtatgcgcgccagccttatcccccatcagttgtacatt
gcccgcgaagtgggccagcgccacgcgcctcgcgtactgctggctgatgaggtggggctg
gggaaaaccattgaagcgggcatgattatccaccagcaactgctggccgggcgtgccgag
cgcgtgctgatagtggtgccggaaaccttgcagcatcagtggctggtggaaatgctgcgc
cggtttaatttgctgttttccctgtttgatgacgagcgctacgccgaagcgcgtctggac
agcgataacccgtttgaaaccgagcagttaattatctgctcgctcgattttgtgcgccgc
aacccctcacgctttgaacagttacaggatgccgaatgggacttgctggtggtcgatgaa
gcgcaccatctggcctggagtgaagcggcaccgagtgcggcgtaccgcgccattgagaag
ctcgccgaggtcacgcccgccgtcttgctgttgaccgcaacgccagagcagttaggccag
gaaagccactttgcccgcctgcgcctgcttgacccggatcgcttccatgattatcaggaa
tttgtcgccgaacaacagcactaccgcccggtggcggatgccgtcagcttgctgctgggc
ggcgagcctatcagtgatgcgcagcgcaacatgttaagcgacatgctgggcgagcaggat
atcgagccgctgctgaaatccatcgccagcgagcgtgaggatgctatcagcgcccgtcag
gagctgatagcgatgctgatggatcgccacggcaccagccgggtgctgttccgcaatacc
cgtcagggggtaaaaggcttcccgaaacgcgaactgcaccagataaaactgccgctgccg
acgcaatatcaaaccgcgatgcgcgtcgccggtatcatgaatgcgcgtaaatcagcggaa
gactgtgcccgtgatatgctctacccggagcagatttatcagcaatttgaagatgataac
gcgacatggtggagctttgacccgcgcgttgaatggatgctggatttcctcaccagccac
cgcgatgaaaaagtgctggttatctgcgccaaagccgccaccgcgctgcaactcgaacaa
gtgctgcgcacccgcgaggcgattcgcgcagccgtgttccacgaagggctgtcgattctt
gagcgtgaccgggcggcagcgtatttcgcctccgccgaagacggcgcacaggtgcttatc
tgctccgagataggctccgagggccgcaacttccagttcgccagccatctgatcatgttt
gatctgccgtttaacccggatctgctggagcagcgcatcggtcgtctggatcgtatcggc
cagagccgtgacatccagattatggtgccgtatctggaaaataccgcgcaggcattgctg
gtacgctggtatcacgaagggctcgatgccttcgagcacacctgcccgaccggtcgcacc
atttatgataagcaccatgaacagttgattacgctgctggcgaaacccaccgaaaccgac
gggcttgatgagctcatccacacctgtcgccagcaacatgaccagctcaaggcacaactg
gaacaggggcgtgaccgcctgctggaactgcactccaatggcggtgagcaggcacaggcg
ctggctgcggcaatcgccgagcaggatgatgatgtcggtctggtcaattttgccctcaac
ctgtttgatatcatcggtatccatcaggatgaccgcagcgacaacctgatcgtgctgacg
ccctctgagcatatgctggtgccggatttccccggcctggcgcaggatggctgcaccatc
acctttgaccgggaacagtcgctgtcgcgcgaagatgcgcagttcgtcagctgggagcac
ccgcttatccgtaacgggctggatctggtgctttcaggtgacaccggcagttgcgccgtc
tcactgctgaaaaataaagccttgccggttggcaccctgctggcggagctggtgtatgtg
gttgaagcgcaggcaccgaaaaaactgcaactgacccgcttcctgccgccgacgccgatt
cgcgtactgctcgatcgcaaaggcaccaacctggccacacaggtggagtttgaaagtttc
aatcgtcagttgagcgcggtgaaccgtcatacctccagcaagctggtcaatgcggtacag
gatgatgtccatgccatgctgcaaaaggcccaaccgctggttgatgcacaggcacaggtg
ctgataaccgaagcgaaaaaccgtgccgatgccgaattacgccgcgaacttgaacgcctg
caagcgctgaaagccgttaacccgaatattcgtgatgacgagctggaagcgctggaagaa
cagcgtgaacaggtgctgcaaaacctgcaacaggccaactggcgtcttgatgccatccgt
ctggtgatggtggcgcatcagtaa
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