Dickeya aquatica: DAQ1742_03947
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Entry
DAQ1742_03947 CDS
T06021
Symbol
amiB
Name
(GenBank) N-acetylmuramoyl-L-alanine amidase
KO
K01448
N-acetylmuramoyl-L-alanine amidase [EC:
3.5.1.28
]
Organism
daq
Dickeya aquatica
Pathway
daq01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
daq00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
DAQ1742_03947 (amiB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
daq01011
]
DAQ1742_03947 (amiB)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
daq03036
]
DAQ1742_03947 (amiB)
Enzymes [BR:
daq01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.28 N-acetylmuramoyl-L-alanine amidase
DAQ1742_03947 (amiB)
Peptidoglycan biosynthesis and degradation proteins [BR:
daq01011
]
Peptidoglycan biosynthesis and degradation
Amidase
DAQ1742_03947 (amiB)
Chromosome and associated proteins [BR:
daq03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
DAQ1742_03947 (amiB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amidase_3
LysM
LysM3_LYK4_5
NMB0315_dom_I
LysM_RLK
AMIN
LysM1_NFP_LYK
Motif
Other DBs
NCBI-ProteinID:
SLM64727
UniProt:
A0A375AFG3
LinkDB
All DBs
Position
complement(3952197..3953909)
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AA seq
570 aa
AA seq
DB search
MMVRLINTVLLGLLLLTSPLWASNLTDIRVNNAASEAVMTLSFSGQPVYDYAVANNPSRV
TIDIKQSGVMKGLPLAFNGQNLIARIRTSPASDPKSLRLVLDLTQKVQVRAAKESNSAVF
TLTAERKPPPAKPVSSPAQPTAQAARNPIVPQTASAAGASNRGGGRIGNGEKITVAIDAG
HGGQDPGAIGPGGLNEKTVTIAIARKLRAIMSADPAFKPVLTRDGDYFISVMGRSEVARK
QGANVLVSIHADAAPNRGATGASVWVLSNRRANSEMAGWLEQHEKQSELLGGAGDLLANS
AADPYLSQAVLDLQFGHSQRVGYDVAVKVLRELQRVGSLHKRRPEHASLGVLRSPDIPSL
LVETGFISNPSEERLLGSSEYQEKIANAIYQGLRSYFQAHPLQNVPKQENRPLHTQTVKN
TAAEPHRNTSSAAATTGGQRHTVATGETLSGIAARYGVSMAAIREINRLKKDGVWVGQRL
KIPSGALAANTPSSKPSSAKASSSKAVSTASVKKDVTRKEATVRKHKVVRGDTLSAIASR
YGVSMKAIQQVNNMSTGTVQLGQTLIIPSA
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgatggtgcgcctgataaataccgttctgcttgggttattgctgctaacgtcgccattg
tgggccagtaacctgaccgatatccgggtgaataatgctgccagtgaagcggtgatgacg
ctcagtttcagcggccagccggtatatgactatgcggtagcaaataacccgagccgtgtg
acgattgatatcaagcagtctggcgtaatgaaagggctgccgctggcattcaacggtcag
aacttgattgcccgtattcgaacgagcccggccagcgatccgaaaagcctgcggctggtg
ctggatttaacgcagaaagtgcaggttcgcgcagccaaagagagcaatagtgcggtcttt
acactcacggctgaacgcaagccaccaccggctaaaccggtatcttcgccagcgcagccc
accgcgcaggctgcacgtaacccgatagtgcctcagacggcatctgctgccggggcctca
aaccgggggggcgggcggataggtaacggcgagaagatcacggtcgcgattgatgccggt
cacggcggtcaagacccaggggccatcggcccggggggactaaatgaaaaaacggtcact
atcgccattgcccgtaaactgcgcgctatcatgagtgccgacccggcgtttaaaccggtg
ctcacccgcgatggcgattactttatttccgtgatggggcgttctgaggttgcgcgtaag
caaggggcgaatgtgctggtttcgattcatgccgatgccgcaccaaaccgcggggctacc
ggcgcatcggtctgggtgttgtccaaccggcgagcgaacagtgaaatggccggctggctg
gagcagcacgagaaacagtctgagttgctgggtggcgcaggcgatcttttggccaacagc
gcggctgacccttacctcagccaggcggtgctggatctccagtttggccattcccagcgc
gtcgggtatgacgtggcggtaaaagtgttgcgtgaattacagcgcgtggggagcttgcac
aaacgcaggccggaacatgccagtctgggcgttctgcgctcaccggatattccttcttta
ctggtggaaaccgggtttatttctaatccaagcgaggagcggctgctgggcagcagtgag
taccaggagaaaattgccaatgccatttatcagggattgcgcagttatttccaggctcat
ccgttacaaaatgtcccaaagcaggaaaaccgtccgcttcatacgcagacggtgaaaaac
acagcggctgagccacatcgcaatacgtcatcggccgccgccacaaccggtggccagcgt
catacggtggctaccggtgaaacgctatcgggtattgccgcgcgttacggtgtcagtatg
gcggcgattcgggagataaatcgtctaaagaaagacggcgtgtgggtcgggcagcgtttg
aaaatcccctccggagcattggccgccaatacgccgtcgtctaaaccctcatcggccaaa
gcgtcatcctcgaaggctgtctctacggcatcagtaaaaaaagatgtcaccagaaaagag
gcaacggtgagaaagcataaagtggtacgcggggatacactaagtgcgattgccagccgt
tatggtgtgagcatgaaagccatccagcaagtcaacaatatgtctaccggtaccgtgcag
ttgggccagacgctgataatcccttctgcctga
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