Dickeya aquatica: DAQ1742_04022
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Entry
DAQ1742_04022 CDS
T06021
Symbol
rsmB
Name
(GenBank) Ribosomal RNA small subunit methyltransferase B
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
daq
Dickeya aquatica
Brite
KEGG Orthology (KO) [BR:
daq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
daq03009
]
DAQ1742_04022 (rsmB)
Enzymes [BR:
daq01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
DAQ1742_04022 (rsmB)
Ribosome biogenesis [BR:
daq03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
DAQ1742_04022 (rsmB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
NusB
FtsJ
Methyltransf_25
Methyltransf_37
Methyltransf_31
Methyltransf_5
Methyltransf_15
Methyltransf_12
Methyltransf_11
Methyltransf_33
MTS
Ubie_methyltran
Methyltr_RsmF_N
Motif
Other DBs
NCBI-ProteinID:
SLM64790
UniProt:
A0A375AFD1
LinkDB
All DBs
Position
4030448..4031740
Genome browser
AA seq
430 aa
AA seq
DB search
MKSTYNLRSIAANTLIQVVEQGQSLSHILPALQRNISEKDRALLQEICFGVLRVLPELEW
YLHQLMAKPLAGKQKILHYLLMVGLYQLTYTRIPAHAALAETVNGAVALKRPQLKGLING
VLRQFQRQQDELQLRVKNTPAHYSHPDWLLLRLKAAYPDQWEHIVTANNQHPPMWLRVNR
LHHTREAYLGLLQEQGINAHPHAFYTDAVRLETPCAVNQLPGFEQGWVTVQDASAQGCIH
WLAPQNGDDILDLCAAPGGKTTHILEAAPLARVVAVDIDEQRLKRVHENLHRLKQHADVK
CGDGRTPSLWCGDKLFDRILLDAPCSATGVIRRHPDIKWLRRDSDINELSALQQSILEAI
WPHLKKGGTLVYATCSVLPEENQQQIASFLQRHTDASLSDTGNLSKPGIQNLPAALDGDG
FFYAKLVKTS
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagcacctataaccttcgcagtatcgccgctaacaccctgattcaggttgttgaa
caaggccaatctctcagtcacatcctccctgcacttcagcgaaatattagcgaaaaggat
cgggcgctacttcaggagatctgctttggcgtattacgcgtactgccagagctggagtgg
tatctgcatcagttgatggcaaaaccactggctggtaagcaaaaaattcttcattacctg
cttatggttggcttgtatcagctcacgtatacacgcattcctgcccatgcagcactggca
gaaacggtcaatggtgccgtggcactcaagcgccctcagttaaaaggcctgattaatggc
gttttgcgtcagtttcagcgtcagcaagatgagttgcagttaagagtaaaaaatacgcca
gcccattactcacaccctgactggctactgctccgcttgaaagcggcctacccggatcaa
tgggaacacatcgttaccgcgaataatcagcatcccccgatgtggctcagagtcaaccgg
ctacatcatacgcgcgaagcttatctggggttgctgcaagaacaaggcattaatgctcat
ccacacgccttctataccgatgcagtcaggcttgaaacaccgtgtgccgttaatcaatta
ccagggttcgagcaaggatgggtaacagtacaggatgcgtcagcacagggatgtattcac
tggcttgctcctcaaaatggtgacgatattcttgatctgtgcgccgcgcctggaggaaaa
accacgcacatactcgaagcggctccactcgcgcgcgttgttgcggttgatattgatgag
caacggttaaagcgagttcatgaaaatctacaccgcctgaagcaacatgcagacgtaaaa
tgtggcgacggcagaacaccatcattgtggtgtggtgacaaattgtttgatcgcattcta
ctggatgcgccttgttcagcaacaggagttattcgcagacaccctgatatcaaatggtta
cgccgtgatagcgatatcaacgaattatctgccctgcaacagtcaattctggaggctatc
tggccgcatttaaaaaaaggcggtaccctcgtctatgcaacctgttccgtcttaccggaa
gaaaatcagcagcagatagcgtcatttctgcaacgccataccgatgcttcactaagtgat
acgggcaatctctcaaaaccagggattcaaaatctgccagccgctctggatggtgatggt
ttcttttatgcgaaactggtaaaaacctcatga
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