Dickeya aquatica: DAQ1742_04112
Help
Entry
DAQ1742_04112 CDS
T06021
Symbol
pelB
Name
(GenBank) Pectate lyase B precursor
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
daq
Dickeya aquatica
Pathway
daq00040
Pentose and glucuronate interconversions
daq01100
Metabolic pathways
daq01120
Microbial metabolism in diverse environments
daq02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
daq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
DAQ1742_04112 (pelB)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DAQ1742_04112 (pelB)
Enzymes [BR:
daq01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
DAQ1742_04112 (pelB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
SLM64879
UniProt:
A0A375AGZ5
LinkDB
All DBs
Position
4098586..4099713
Genome browser
AA seq
375 aa
AA seq
DB search
MKALITPITAGLLLALSQTAMAATDTGGFAVTAGGNVAGAVSKTANSMQDIVDIIAAARL
DANGKKVKGGAYPLVITYTGNEDSLINAAAADICSQWSKDPRGVEIKEFTKGVTIIGAKG
SSANFGIWIKKSSDVVVQNMRIGYLPGGAKDGDMIRVDDSPSVWIDHNELFAANHECPGT
PDNDTTFESAVDIKGASDTVTVSYNYIHGVKKVGLDGSSSSDTGRNITYHHNLYNDVNAR
LPLQRGGLVHAYNNLYGNVTSSGLNVRQNGQALIENNWFENAVNPVTSRYDGKNFGTWVL
KNNNITKPADFATYNITWNGDTKPYVNADSWTSNGTFPAVTYSYSPVSAQCVKNKLANYA
GVDKNLATLTSAACQ
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcactcattaccccgattaccgccgggctgttactggcattaagtcaaaccgca
atggcggctaccgataccggaggctttgccgttacggcaggtggtaacgtggctggcgca
gtcagtaaaaccgccaattccatgcaggatatcgtcgatatcattgccgctgcgcgtctg
gacgccaatggcaagaaggtcaaaggcggtgcttatcctctcgttatcacctacaccggc
aacgaagacagcctgatcaacgccgccgccgctgacatctgttcgcagtggagtaaggac
ccgcgtggcgtggaaatcaaggagttcaccaaaggtgtcaccatcatcggtgctaaaggc
tcatcggccaactttggtatctggattaaaaagtcatctgacgtcgtggtacagaacatg
cgtattggctatttgccgggcggcgcgaaagatggcgacatgatccgggtggatgattcg
ccgagcgtatggattgatcacaacgagctgtttgcggcgaaccatgagtgccccggtaca
ccggataacgacaccacctttgaatccgccgtggatatcaagggcgcatcggataccgtg
accgtctcttacaactacatccacggggtgaaaaaagtcggcctggatggctcaagctcc
agcgataccggccgcaatatcacctatcaccacaacctgtataacgacgttaacgcccgc
ctgccgctgcaacgtggcggcctggtgcatgcctataacaacctgtacggcaatgtcacc
agctctggcctgaatgtgcgccagaatggccaggcactgattgaaaacaactggtttgag
aacgcggtgaaccccgtcacatcacgctatgatgggaaaaatttcggcacctgggtgctg
aaaaataacaacattaccaaaccggccgatttcgctacctacaacattacctggaatggc
gacaccaagccgtatgtcaatgcggatagctggacatccaacggaacattccctgccgtt
acctacagctacagcccggtcagcgcccagtgtgtgaaaaacaaactggccaactacgcc
ggggtggataaaaacctcgcaacgctcaccagtgcggcctgccagtaa
DBGET
integrated database retrieval system
