Dickeya aquatica: DAQ1742_04146
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Entry
DAQ1742_04146 CDS
T06021
Symbol
yhgF
Name
(GenBank) Transcription accessory protein (S1 RNA-binding domain)
KO
K06959
protein Tex
Organism
daq
Dickeya aquatica
Brite
KEGG Orthology (KO) [BR:
daq00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
DAQ1742_04146 (yhgF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
HHH_7
YqgF
S1_RRP5
T2SSK
ALIX_LYPXL_bnd
HHH_6
Motif
Other DBs
NCBI-ProteinID:
SLM64911
UniProt:
A0A375AGB7
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Position
4134787..4137114
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AA seq
775 aa
AA seq
DB search
MTNALSQIIASELQARTEQVSAAIQLLDEGNTVPFIARYRKEVTGGLDDTQLRQLESRLG
YLRELEDRRQTILKSIDEQGKLTEALASAIHGTLSKTELEDLYLPYKPKRRTRGQIAIEA
GLEPLADSLWNDPSQTPELAAAAYVQAENGVADVKAALDGARYILMERFAEDATLLAKVR
DYLWKSAHLVSRVIEGKDDEGAKFRDYFDHHEPLAQVPSHRALAMFRGRNEGILQLSLNA
DPQYDEPPKESHGEHIIISHLGLRLNNAPADNWRRAVVNWTWRIKVLLHLETELMGSVRE
KAEEEAINVFARNLRDLLMAAPAGLHATMGLDPGLRTGVKVAVVDATGKLVATDTVYPHT
GQAAKAAAVVAALCIKHQVALVAIGNGTASRETERFFLDTQQQFPEVKAQKVIVSEAGAS
VYSASELAAQEFPNLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTLLAK
KLDAVVEDCVNAVGVDLNTASVALLTRVAGLTRMMAQNIVNWRDENGRFSNRAQLLKVSR
LGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAVTEQKLQELMGNTSALRALK
PSEFTDSRFGLPTVTDILKELEKPGRDPRPEFKTATFADGVETLNDLMPGMILEGAVTNV
TNFGAFVDIGVHQDGLVHISSLADRFVEDPHQVVKAGDIVKVKVLEVDLPRKRIALTMRL
DEQPGEGNSRRGGGARDNAAPRNAPAGKAKSRPANTPSAGNSAMSDALAAAFKKR
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgacgaacgcattaagtcagattatcgccagcgaattgcaggctcgcaccgaacaggtc
agcgcggctattcagctgcttgacgaaggtaacaccgtgccatttatcgcccgttaccgt
aaagaagtgaccggcgggctcgatgatacccaactgcgccaactggaaagccgcctgggc
tacctgcgcgagctggaagaccgccgccagaccatcctcaaatccattgatgagcagggc
aaacttaccgaagcgctggccagtgccattcacggcacgctgagtaaaaccgagctggaa
gacctctacctgccctataaaccgaaacgccgcacccgtgggcaaatcgccattgaagcc
gggctagagccgctggcagacagcctgtggaacgacccgtcgcaaacaccagagctggcg
gcagcggcttacgtgcaggccgaaaacggcgtcgccgatgtcaaagccgcgctggacggc
gcgcgctatattctgatggagcgttttgccgaagatgccacactgctggccaaagtacgt
gattatctgtggaaaagtgcccatctggtgtctcgcgtcatcgaaggcaaagacgacgaa
ggggcgaaattccgcgattactttgaccaccacgagccgctggctcaggtgccttctcac
cgcgcgctggcgatgtttcgcggccgcaacgaaggcattctccagctttcgctcaatgcc
gacccgcaatacgatgagccgcccaaagagagccacggtgagcacatcatcatcagccat
ctcgggttgcgcctgaataacgctccggcggataactggcggcgtgcggtggtgaactgg
acgtggcgcatcaaggtgctgttgcatctggaaaccgagctgatgggcagcgtgcgcgag
aaagccgaagaagaagccatcaacgtgtttgcccgcaacctgcgtgacctgctgatggcg
gcccctgccggattacacgccaccatggggcttgaccccggcctgcgtaccggggtgaaa
gtcgcggtggtggatgccaccggcaaactggtggcgaccgataccgtctacccgcatacc
ggtcaggcggccaaggccgcggccgtggtggcggcgctgtgtatcaagcatcaggtggcg
ctggtggctatcggtaacggtacggcatcacgcgaaaccgagcgttttttcctcgatacg
caacagcaatttcctgaggtgaaagcccagaaggtgatcgtcagtgaggcgggtgcctcg
gtctattccgcctcggagctggcagcacaagagttcccgaacctcgacgtttcgctgcgc
ggggcggtgtccatcgcccgccgcctgcaagacccgctggccgagctggtaaaaattgac
ccgaaatccatcggtgtcggccaataccagcacgatgtcagccagacgttgctggcgaaa
aaacttgatgcggtggtggaagactgcgtgaacgccgtcggcgttgatctcaataccgcc
tcggtcgccttgctgacccgcgttgccgggctgacgcgcatgatggcgcaaaacatcgtc
aactggcgtgatgaaaatggccgttttagcaaccgtgcccagctcttaaaagtcagccgc
ctcggcccgaaagcctttgagcagtgcgcggggtttttgcgcatcaaccacggtgacaac
ccgctggatgcctccaccgttcacccggaggcctacccggtagtcgagcgcattctcgca
gtcaccgaacagaaactgcaagagttgatgggtaacaccagcgcgctgcgggcgctgaaa
cccagcgagttcacagacagccgctttggcctgccaaccgtgaccgacatcctcaaagag
ctggaaaaaccggggcgtgacccgcgacccgagttcaaaaccgccacctttgccgacggt
gtagaaacgctcaatgacctgatgcccggcatgatcctcgaaggcgcagtgaccaacgtc
accaacttcggcgcatttgtcgatatcggcgtacatcaggacgggttagtgcacatctct
tctctggccgaccgctttgtagaagacccgcatcaggtggtcaaagccggggatatcgtg
aaggtaaaagtgctggaagtggacttgccgcgcaaacgtatcgccctgaccatgcggctg
gacgaacagcccggcgaaggcaacagccgtcgcggcggcggagcgcgcgacaacgcggca
ccgcgcaacgcaccggcgggcaaagccaaatcgcgcccggccaataccccctcggcaggc
aacagcgccatgagcgatgcgctggcagcggcgtttaaaaaacgctaa
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