Dickeya aquatica: DAQ1742_04191
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Entry
DAQ1742_04191 CDS
T06021
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
daq
Dickeya aquatica
Pathway
daq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
daq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DAQ1742_04191 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
daq03019
]
DAQ1742_04191 (recQ)
03400 DNA repair and recombination proteins [BR:
daq03400
]
DAQ1742_04191 (recQ)
Enzymes [BR:
daq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DAQ1742_04191 (recQ)
Messenger RNA biogenesis [BR:
daq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DAQ1742_04191 (recQ)
DNA repair and recombination proteins [BR:
daq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DAQ1742_04191 (recQ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
SLM64956
UniProt:
A0A375AGB9
LinkDB
All DBs
Position
complement(4189682..4191493)
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AA seq
603 aa
AA seq
DB search
MNRESLAVQVLRETFGYQQFRPGQQAIINAAIGGRDCLVIMPTGGGKSLCYQIPALVLDG
LTLVVSPLISLMKDQVDQLQAYGVAAACLNSTQTREQQQEVFNACRRNELKLLYVAPERL
STEGFLEQLAHWNTTLIAIDEAHCISQWGHDFRPEYRALGQIKQQFPALPVVALTATADE
TTRQDIARLLDLRDPLTNISSFDRPNIRYTLVEKFKPLDQLWLFIQGQRGKSGIVYCNSR
AKVEDLCARLQNRGLSVGAYHAGLENDRRAQVQEAFLRDDLQVVVATVAFGMGINKPNVR
FVVHFDIPRNIESYYQETGRAGRDGLPAEAALFYDPADMAWLRRCLEEKPAGMQLDIERH
KLNAMGAFAEAQTCRRLVLLNYFGENRQQPCGNCDICLDPPRRYDALVDAQKALSCVYRV
GQRFGIGYIAEVLRGANNQRIREFGHDALPVYAIGKDKTQEQWVSILRQLIHLGLLAQNI
AHHSALQLTESARPVLRGEVPLQLAVPRVGSLSKPKASQKSYGGNYDRKLFAKLRKLRKS
IADEDNIPPYVVFSDATLLEMAEQLPVTASELLAVNGVGQRKLERFGTPFMTVIREHLDN
GEA
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
gtgaatagagaatcgctggcggtacaggtattgcgggaaaccttcggttatcagcaattc
cggcccggccagcaggcaattatcaacgctgctatcggcgggcgtgactgtctggtgatt
atgccgacaggcgggggcaaatccctgtgttatcaaattccggcgctggtgcttgatggg
ctgacgctggtggtgtcaccgctgatttcgctgatgaaagatcaggttgaccagctacag
gcttacggcgtggccgccgcctgccttaattccacgcaaacccgtgaacagcagcaagag
gtgtttaacgcctgccgccgcaatgaactgaaattgctgtatgtggcccccgagcgtctg
agcaccgaagggtttctggagcaactggcccactggaataccacgctgattgccattgac
gaggcgcactgtatttcccagtgggggcatgattttcgcccggaataccgcgcgctcggt
caaatcaaacagcaatttccggcgctgccggtcgtggcgctgaccgcgacggcggatgag
actacccggcaggacattgcccgcctgctcgatttgcgtgacccgctgacgaatatcagc
agctttgaccggcctaatatccgctacacgctggtcgaaaaattcaaaccgctcgaccag
ctctggctgttcattcagggccagcgcggcaaaagcggcattgtctattgcaatagccgg
gcaaaggtggaagacctgtgcgcacgtctgcaaaaccgtgggctcagtgtcggggcgtat
cacgccgggctggagaacgatcgccgcgcacaggtgcaggaagcgtttttgcgtgatgac
ctgcaagtggtggtggcgacggtggccttcggcatggggatcaacaaaccgaatgtgcgc
tttgtggtgcatttcgatattccacgcaatatcgagtcctactatcaggaaaccgggcgc
gccgggcgcgatggcctgcccgccgaggcggcgctgttttatgacccggcagatatggcg
tggctgcgccgttgtctggaagaaaaaccggccggaatgcaactggatattgaacgccac
aagctcaatgccatgggcgcgttcgccgaagcgcaaacctgtcgccgtctggtgttgctg
aactactttggcgagaaccgccagcagccgtgcggtaactgtgacatctgccttgatccg
ccacggcgttatgacgcactggtggatgcgcaaaaagcgctgtcttgcgtgtatcgcgtt
gggcagcgtttcggtatcggctacattgctgaggtgctgcgcggggcgaataatcagcgc
atccgtgaattcggccatgatgcgttgccggtgtacgctatcgggaaagacaaaacccag
gagcagtgggtcagtattttgcgtcagctcattcatcttgggttgctggcgcaaaatatt
gcccaccacagcgcgctgcaactcacggaatcagcccggccggtgctgcgcggcgaggtg
ccgttacaactggcggtgccgcgcgtcggcagcctgagtaaacccaaagccagccagaaa
agctatggcggcaattatgaccgcaaattgtttgccaaactgcgtaaattgcgtaaatcc
attgctgatgaagacaatattcctccgtatgtggtgtttagcgatgccaccttgctggaa
atggccgaacaactaccggtgacggccagcgaattgctggcggtaaacggggttggccag
cgtaaactcgagcgttttggtacgccgtttatgacggttatccgcgagcatctggataac
ggcgaggcataa
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