Dickeya aquatica: DAQ1742_04198
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Entry
DAQ1742_04198 CDS
T06021
Symbol
uvrD
Name
(GenBank) ATP-dependent DNA helicase UvrD/PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
daq
Dickeya aquatica
Pathway
daq03420
Nucleotide excision repair
daq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
daq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DAQ1742_04198 (uvrD)
03430 Mismatch repair
DAQ1742_04198 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
daq03400
]
DAQ1742_04198 (uvrD)
Enzymes [BR:
daq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DAQ1742_04198 (uvrD)
DNA repair and recombination proteins [BR:
daq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DAQ1742_04198 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
DAQ1742_04198 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_22
Motif
Other DBs
NCBI-ProteinID:
SLM64962
UniProt:
A0A375AFS7
LinkDB
All DBs
Position
complement(4196883..4199045)
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AA seq
720 aa
AA seq
DB search
MDVSDLLDSLNDKQRDAVAAARSNMLVLAGAGSGKTRVLVHRIAWLLTVENCSPYSIMAV
TFTNKAAAEMRHRIDQLIGSSQGGMWIGTFHGLAHRLLRAHHLDAGLPQDFQILDSEDQL
RLLKRLVKALNLDEKQWPPRQAMWYINGKKDEGLRPASIESYGNPVEQTWLRIYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILQHYRDRFHNILVDEFQDTNRIQYAWVRLLAGDS
ARVMIVGDDDQSIYGWRGAQVENIQHFLRDFSQVTTIRLEQNYRSTATILNAANALIAHN
GDRLGKNLWTDGIDGEPISLYCAFNELDEARFVVNRIKVWQETGGALSECAILYRSNAQS
RVLEEALLQQSLPYRIYGGMRFFERQEIKDALSYLRLMTNRNDDAAFERVVNTPTRGIGD
RTLDVVRQTARDRQLTLWQATRTLLQEKALAGRAAAALQRFLELVDALASDTAELPLHVQ
TDRVIRDSGLWSMYEQEKGEKGQTRVENLEELVTATRQFSYQDDDQDLPPLQAFLSHAAL
EAGEGQADAYQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMQKLTLTYAESRRLYGKEVYHRPSRFVGELPVGCVEEVRLRASVSRPVNHQRLG
TPVSQSDSGYTLGQRVRHAKFGEGTIVNVEGSGEHCRIQVAFAGQGIKWLVAAYARLEAV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtatctgacctgcttgacagcctgaacgataaacagcgtgatgccgtagcggcg
gcgcgcagcaacatgctggtgctggctggtgcaggcagtggcaaaacccgcgtactggtg
catcgcattgcctggttgctgacggtggagaattgttcaccgtattcgattatggccgtg
acatttaccaataaagctgccgccgagatgcgccaccgtatcgaccagttgattggctcc
agtcagggcggcatgtggataggcacgttccacgggctggcgcaccgcctgttgcgcgcg
caccatctggatgccgggctgccgcaggacttccagatccttgatagtgaagatcagctc
cggctgctgaaacggcttgtcaaagcgctgaatctcgatgagaagcagtggccgccccgg
caggcgatgtggtacatcaacggcaaaaaggatgaggggctacggcctgccagcattgag
agctatggcaacccggttgagcagacctggctgcgcatttatcaggcgtatcaggaggcg
tgcgatcgcgccgggctggtggattttgccgaactgctgctgcgcgcccatgagctgtgg
ctcaacaagccgcacatcctgcaacactaccgcgatcgctttcacaacattttggtggac
gaatttcaggacaccaaccgcattcagtatgcctgggtgcgcctgctggcgggcgacagc
gcccgggtgatgatagtcggcgatgacgaccagtcgatttacggctggcgcggggcacag
gtagaaaacatccagcactttctgcgcgatttctcgcaggttacgaccattcggctggag
caaaactaccgctcgacggccactatcctcaacgcggccaacgcgctgattgctcataat
ggcgacaggctgggcaaaaacctgtggactgacggcatcgacggcgagccgatttcgctc
tattgcgcgtttaacgaactcgacgaagcgcgcttcgtggtaaaccggattaaagtctgg
caggaaaccggcggtgcgctcagtgagtgcgccattctctatcgcagcaacgcccagtcg
cgtgtgctggaagaggcgttgctgcaacaaagcctgccgtaccggatttatggcggcatg
cgcttttttgagcgtcaggaaattaaagatgcgttgtcttatctgcgtctgatgacgaac
cgtaatgatgatgccgcgttcgagcgggtggtcaatacgccgacgcgcggcattggcgat
cgcacgctggatgtggtgcgccagacagcacgcgatcgccagttgacgctgtggcaagcc
acgcgcaccttgctacaggaaaaagcgctggccgggcgcgcagcggcggcgttgcaacgt
tttctggaactggtggatgcgctcgccagcgatacggcggaattgccgctgcatgtgcaa
accgaccgggtgatccgtgattccggcttgtggagtatgtacgagcaggagaaaggcgaa
aaaggccagacgcgggtggaaaacctggaagagctggtcacggcgacccgtcaattcagt
tatcaggacgacgatcaggacttaccgccgctacaggcgtttttgtcccacgcggcgctt
gaggcgggcgaaggccaggctgatgcctatcaggatgcggtgcaactgatgacgctgcac
tcggccaaagggctggagtttccgcaggtctttatcgtcgggatggaagaaggcatgttc
ccaagccagatgtcgctggatgagggcgggcgtctggaagaggagcgccgtctggcgtat
gtcggggtgacgcgcgcgatgcaaaagctgacgttgacgtatgccgaaagtcgccgcctt
tacggcaaggaagtctatcaccgcccgtcgcggtttgtcggtgaactgccggtcgggtgc
gtcgaggaagtgcgcttgcgtgccagcgtgtcgcgcccggtcaatcatcagcggttgggg
acgccggtcagccagagcgacagcggctatacactggggcagcgggtgcgccatgccaag
ttcggcgagggcactatcgttaacgttgaaggcagtggcgaacattgccgcattcaggtg
gcgtttgccgggcagggcattaaatggctggtggccgcctatgcgcgtctggaggcggta
taa
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