Dickeya aquatica: DAQ1742_04202
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Entry
DAQ1742_04202 CDS
T06021
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
daq
Dickeya aquatica
Pathway
daq00300
Lysine biosynthesis
daq00470
D-Amino acid metabolism
daq01100
Metabolic pathways
daq01110
Biosynthesis of secondary metabolites
daq01120
Microbial metabolism in diverse environments
daq01230
Biosynthesis of amino acids
Module
daq_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
daq00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DAQ1742_04202 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DAQ1742_04202 (dapF)
Enzymes [BR:
daq01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
DAQ1742_04202 (dapF)
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Ortholog
Paralog
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
CntK_N
Motif
Other DBs
NCBI-ProteinID:
SLM64966
UniProt:
A0A375AGD0
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All DBs
Position
complement(4201450..4202274)
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AA seq
274 aa
AA seq
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MQFTKMHGLGNDFMVVDAVTQNIYFSPDLIRRLSDRHCGVGFDQLLIVEPPYDPELDFHY
RIFNADGSEVAQCGNGARCFASFVRLKGLTNKREIHVSTHNGRMVLSVTEDESVRVNMGE
PNFEPQQVPFRATKAEKTYILRAGEHTVLCGVVSMGNPHCVIQVDAVESAPVEILGPLLE
NHERFPERANVGFMQVVNPNQIRLRVFERGAGETQACGSGACAAVAVGIQQGLLAADVKV
KLPGGVLDIHWDGPGHPLFMTGPTTHVYDGFIHL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcagttcaccaaaatgcacggcctgggcaacgactttatggttgttgatgccgtcacc
cagaatatctacttttcaccggatttgattcgccggttatcggacaggcactgcggtgtg
gggttcgatcagttgttgatagtcgagccgccttacgatcccgagctcgattttcactac
cgcatcttcaatgccgatggcagcgaagtggcgcagtgtggtaacggtgcccggtgtttt
gctagttttgtgcgtctcaaaggcttgaccaacaaacgtgagatccatgtcagtacccat
aatggccgtatggtactgtcggtcacagaagatgaatctgtgcgggtgaatatgggcgag
cccaattttgagccgcagcaggtgccttttcgtgccacaaaagcggagaaaacctacatc
ctgcgtgccggtgagcacaccgtgttgtgcggggttgtatccatggggaacccccactgc
gtgattcaggttgatgcggttgagagcgcaccggtagagatactcgggccgttgctggaa
aaccatgagcgttttcccgaacgcgccaatgtgggctttatgcaggtggtgaaccccaac
cagatccggctacgggtgtttgaacgtggtgccggagaaacgcaggcctgtggcagcggt
gcatgtgcggcggttgcggtggggattcagcaagggttgctggccgccgatgtgaaagtc
aaactgccgggcggtgtactggatattcactgggatggcccgggtcatcccctgtttatg
accggcccgacgacacacgtttatgacggatttattcatctatga
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