Dickeya aquatica: DAQ1742_04294
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Entry
DAQ1742_04294 CDS
T06021
Symbol
cytR
Name
(GenBank) CytR and CRP cooperate to regulate genes involved in nucleoside utiization
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
daq
Dickeya aquatica
Brite
KEGG Orthology (KO) [BR:
daq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
daq03000
]
DAQ1742_04294 (cytR)
Transcription factors [BR:
daq03000
]
Prokaryotic type
Helix-turn-helix
LacI family
DAQ1742_04294 (cytR)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_AraC
HTH_Crp_2
MarR_2
HTH_3
HTH_Tnp_ISL3
HTH_24
HTH_1
TetR_N
HTH_IclR
Sigma54_DBD
Motif
Other DBs
NCBI-ProteinID:
SLM65044
UniProt:
A0A375AG31
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All DBs
Position
4298052..4299122
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AA seq
356 aa
AA seq
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MEPKKFASPATMKDVADKAGVSTATVSRALTSPDKVSALTRRKVEQAAQAVGYSAQHLSR
NLKRHESRTILALVPDISDPFFGKMLRGIEDTAAQRGYLVLIGDCAYQRHGERTFLDLIT
ARQIDGILLLGSPLPFDVGKEERRHLPPMVMANEFAPELDMPTVHIDNLTAAFEAVSYLH
QLGHRRIACIAGPDQIPLSEYRLQGYIQALRRCGLTVDNQYIVRGDFSYDAGARGLTQLM
SHPTPPPPSFVHSDIIALGALTQARKMGLDVPRDLSLIGFDDIEQANHCFPALTTVAQPR
YEIGREATQLLLAQLQQHKVRRGSRLMSSQLVIRDSTAAPASRVTGFKNSGAGQIF
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
ttggagccgaaaaaatttgcctcacctgcgaccatgaaagatgtcgccgacaaggccggc
gtctctaccgcaacagtttcacgcgcgttaaccagcccggacaaagtctctgccctcaca
cgccgaaaagtggagcaggccgcacaggccgtcggttactcggcacaacatctgtcccgc
aatctgaaacgacacgaatcgcgcacgattttggcactggtgcctgatatcagcgatccc
ttttttggcaaaatgctgcgcggtattgaagacacggcggcacagcgcggttatctggtg
ctgatcggtgattgcgcctaccagcgtcatggcgagcgcacatttcttgacttaatcacc
gcccggcaaatagacggcattttgctgctgggctccccgctgccgtttgatgtcggcaaa
gaggagcgccgccacctgccgccaatggtcatggcgaatgagtttgcccccgagctggat
atgccgacggtacatatcgacaacctgaccgccgcgtttgaagccgtcagctatctccat
caattgggtcaccggcggatcgcctgtatcgcaggcccagaccaaatcccgctcagtgag
taccggctacagggttatatacaggcgctgcgacgctgcggcttaacggtcgataaccag
tacattgtgcgtggcgatttcagctatgatgccggagccagagggctgactcagttgatg
tcgcaccctacgcccccaccgccctcttttgtccacagcgatatcatcgcattaggcgca
ctgacacaggcacgaaaaatgggtctggacgtgccgcgtgacctgtcgctgataggtttt
gatgatattgagcaggcgaatcactgctttccggcactgactaccgtcgcccagccacgc
tacgagatagggcgggaagccacgcagttactgctggcgcaattgcagcaacacaaggta
cgcagagggtcgcgcctgatgagtagccagttggttatccgcgacagtaccgccgccccg
gcatcccgtgttacaggctttaagaattcaggtgctggtcaaatattttag
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