Dickeya aquatica: DAQ1742_04427
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Entry
DAQ1742_04427 CDS
T06021
Symbol
rbn
Name
(GenBank) Ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
daq
Dickeya aquatica
Brite
KEGG Orthology (KO) [BR:
daq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
daq03016
]
DAQ1742_04427 (rbn)
Enzymes [BR:
daq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
DAQ1742_04427 (rbn)
Transfer RNA biogenesis [BR:
daq03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
DAQ1742_04427 (rbn)
Prokaryotic type
DAQ1742_04427 (rbn)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
SLM65172
UniProt:
A0A375AGF6
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All DBs
Position
4434700..4435629
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AA seq
309 aa
AA seq
DB search
MELIFLGTNAGVPTQTRNVSSLALDLHGIRPAFWLFDCGEGTQHQILRTPVKPGKLEKIF
ITHLHGDHIFGLPGLLCSRAMGGIDTPLTLYGPCGLKAFVEQALTLSGSYLTYPLNIIEL
DVKEGESARVCEDEHLQVTACVLSHTLYCLGYRIEERPKPGPLNVAKLAAEGVKPGVWFQ
HLRRGETVTLDDGRVLNGWDYVGPATPGKSLAIFGDTRPTPAARLLAAGVDVMVHEATLE
GAMAGRASERGHSTTLQAAAAARDAGARRLIITHFSARYGQADLARLQQECQTVFAATEV
ARDFATFRV
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggaactgatttttctcggcaccaatgccggtgtgccaacccaaacgcgcaacgtcagt
agtctcgcacttgatttgcacggcatccggcctgctttttggttgtttgactgcggcgaa
ggcacccagcaccaaattttgcgcaccccggtcaaaccgggcaagctggagaaaatattc
atcacccacctgcacggcgaccacattttcggcttgccgggcctgttgtgctcgcgcgcg
atgggcggtatcgacacgccactcacgctctacgggccgtgcgggctaaaagcctttgtc
gagcaggcgctgaccctcagcggttcctatctgacttatccgctcaatatcatcgaactg
gatgtcaaagagggggaatcagcgcgggtctgtgaggatgagcacttacaggtcacggcc
tgtgttctctcccacaccctctattgtctgggctaccgtattgaagaacgccccaaaccg
gggccgctgaatgtggcgaaactggcggctgagggcgtaaaacccggcgtctggtttcag
catctcaggcgcggcgaaaccgtcacgctggatgacggacgggtgctgaacggctgggat
tatgtcggccccgccacaccgggtaagtcattggctatctttggcgacacccgccctacg
cctgcggcacgcctgcttgccgcaggcgtcgatgtgatggttcatgaggccacgctggaa
ggggccatggccgggcgcgccagcgaacgcggccactccaccaccttacaagccgccgct
gccgcacgggatgccggagccagacggctcatcatcacgcatttcagcgcccgttacggg
caggcagacctggcgcggttacaacaggagtgccagacggtgtttgcggccaccgaggtg
gcacgcgactttgccaccttccgggtttaa
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