Deinococcus aquaticus: M8445_04585
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Entry
M8445_04585 CDS
T08867
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
daqu
Deinococcus aquaticus
Brite
KEGG Orthology (KO) [BR:
daqu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
daqu03032
]
M8445_04585
03400 DNA repair and recombination proteins [BR:
daqu03400
]
M8445_04585
Enzymes [BR:
daqu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
M8445_04585
DNA replication proteins [BR:
daqu03032
]
Prokaryotic type
DNA Topoisomerases
M8445_04585
DNA repair and recombination proteins [BR:
daqu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
M8445_04585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
WDA59493
LinkDB
All DBs
Position
complement(947282..948319)
Genome browser
AA seq
345 aa
AA seq
DB search
MTSRTEILAGEYLRREGSDPRKFRYFWPDGTSYRDKTGIERISKLAVPPAYQDVYVSPDA
DAELQAFGRDAAGRLQYRYHPDFVQAGALKKWQRLTRFAGALGTLKTTTGADLRAQGLPP
RKVTALMTRLLHVARFRVGSDIYAQQHKTYGLSTLRQRHVKVEGNTVTFHFKGKHGVTQH
KATTDRTLASNITRLLELPGPWLFQTVDADGNRRRVRSSELNAYLKEVIGPFTAKDFRTW
GGTLLAAEYLAEAGVADTEKQARQTLVDCVKFVAADLGNTPAVTRSSYICPVIFDRYLEG
KILDDYEPRAGRTEAELDGLTRSEAALKRLLESEKTLRTRRKKAA
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgacctcccgcaccgagatcctcgccggggagtacctgcgccgcgagggcagcgacccc
aggaagttccggtacttctggccggacggcacctcgtacagggacaagactggcattgaa
cgcatctcgaaactggccgtgccgcccgcctaccaggacgtgtacgtcagcccggacgcc
gacgcggaactccaggccttcggacgcgacgccgccggacgactccagtaccgctaccac
ccggacttcgtgcaggccggcgcgctgaagaaatggcagcgcctcacccgcttcgccggg
gcgctcggcaccctcaaaaccaccaccggagcggacctgcgcgcccagggcctcccaccc
cgcaaggtcacggccctcatgacccgcctgctgcacgtcgcgcgtttccgggtgggcagc
gacatctacgcccagcagcacaaaacctacggcctcagcaccctccggcagcggcatgtg
aaagtcgaggggaacaccgtcaccttccacttcaaaggcaagcacggcgtcacgcagcac
aaggccaccaccgaccgcaccctcgccagcaacatcacccgcctgctcgaactccccggc
ccctggctattccagaccgtggacgccgacggcaaccgccgacgcgtgcgcagcagcgaa
ctcaacgcctacctgaaagaagtcatcggaccgttcaccgccaaggacttccgcacctgg
ggcggcaccctcctggccgccgaatacctcgccgaggcgggcgtcgccgacaccgagaaa
caggcccggcagaccctcgtcgactgcgtcaaattcgtggccgccgacctgggcaacacg
cccgccgtcacccgcagcagctacatctgtcccgtcatcttcgaccgctatctggaaggc
aagatcctcgacgattacgaaccccgcgccggcaggacagaagccgaactggacggcctg
acccgcagcgaagccgccctgaaacgcctgctggaaagcgagaagaccctcaggacgagg
cggaagaaggcggcgtaa
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