Deinococcus aquaticus: M8445_04775
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Entry
M8445_04775 CDS
T08867
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
daqu
Deinococcus aquaticus
Brite
KEGG Orthology (KO) [BR:
daqu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
daqu03016
]
M8445_04775
Enzymes [BR:
daqu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
M8445_04775
Transfer RNA biogenesis [BR:
daqu03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
M8445_04775
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
RNase_II_C_S1
HTH_RNase_II
Motif
Other DBs
NCBI-ProteinID:
WDA59530
LinkDB
All DBs
Position
991991..993382
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AA seq
463 aa
AA seq
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MSLPTAPDLSPAQRTEIELLARGKQAKSRALRDLGLTETPEAAHALLLRAGLWDESRTPY
ADRLGATTQPVTLSVPDFTDEPRLDLTHLDAYAIDDEGNRDPDDAVGIEPLSGGLTRLWI
HVADVAALVPADSELDLEARARGATLYLPDRTIGMLPDELVEKTGLGLHDTTPALSISLD
LDEDGNADAVDVQLTTVRVTRLTYTQAQAALDANQEPFVTLARLARASRDLRTQEGALSI
DLPEVRVKAGPDGAVVSPLPKPEMRAVVQECMTLAGWGAAIYADDHAIPLPFATQDPPQR
EVRGSGLSAEWARRRTLSRTRFQPAPGPHSGMGLDLYTQATSPMRRYLDLVVHQQLRAHL
AGREPLGGKEVAARVAQAGLNADGTRQAERLSRRHHTLRFIAAQPERVWDAVIVDRRGPQ
ATLLIPDLAFDLPTSTPAPLNTELQVRLLDVNLSTLGVRASIV
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgagccttcccaccgcccccgacctcagccccgcgcagcgcacggaaatcgaactgctg
gcacgcggcaagcaggccaagagccgcgccctgcgcgacctgggcctcacggaaacgccg
gaagccgcgcacgccctgctgctgcgcgccggcctgtgggacgagagccgcaccccctac
gccgaccgcctgggcgccaccacgcaacccgtcacgctgagtgtcccggacttcaccgac
gaaccccgcttggacctgacgcacctggacgcctacgccatcgacgacgagggcaaccgc
gacccggacgacgccgtgggcatcgaacccctgagcggcggcctgacccgcctgtggatt
cacgtggccgacgtggccgccctggtgcccgccgacagcgaactggacctcgaagcccgc
gcgcgcggcgcgaccctgtacctgccggaccgcaccatcggcatgctgcccgacgaactg
gtcgagaagaccggcctgggcctgcacgacaccacgcccgccctgagcatcagcctggac
cttgacgaggacggcaacgccgacgccgtggacgtgcaactcacgaccgtgcgcgtcacc
cgcctgacctacacccaggcgcaggccgcgctggacgccaaccaggaacccttcgtgacc
ctggcccgactggcccgcgccagccgcgacctgcgcacgcaggagggcgccctgagcatc
gacctgcccgaggtgcgcgtgaaggccggcccagacggcgccgtcgtgagtcccctgccc
aaacccgagatgcgggccgtggtgcaggaatgcatgaccctggccggctggggcgccgcc
atctacgccgacgatcacgccattccgctgccgttcgccacgcaggacccaccccagcgc
gaggtgcgcggcagcggcctgagcgccgagtgggcgcggcggcgcacgctgtcccgcacg
cgctttcaaccggcgcccggcccgcactccgggatgggcctggacctgtacacccaggcg
accagtcccatgcgccgctacctggacctcgtggtgcaccagcaactgcgcgcccacctg
gccgggcgcgaaccgctgggcggcaaggaggtcgccgcgcgcgtggcccaggcgggcctg
aacgccgacggcacccggcaggccgaacgcctgagccgccgccaccacaccctgcgcttc
attgccgcgcaacccgagcgcgtgtgggacgccgtgatcgtggaccggcgcggcccgcag
gcgacccttctgatcccggacctggccttcgacctgcccaccagcacgcccgccccgctg
aacaccgaactgcaggtgcgcctgctggacgtgaacctcagcacgctgggcgtacgcgcc
agcatcgtctga
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