Deinococcus aquaticus: M8445_07620
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Entry
M8445_07620 CDS
T08867
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
daqu
Deinococcus aquaticus
Pathway
daqu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
daqu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
M8445_07620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
daqu03000
]
M8445_07620
03400 DNA repair and recombination proteins [BR:
daqu03400
]
M8445_07620
Enzymes [BR:
daqu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
M8445_07620
Transcription factors [BR:
daqu03000
]
Prokaryotic type
Helix-turn-helix
AraC family
M8445_07620
DNA repair and recombination proteins [BR:
daqu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
M8445_07620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
MarR_2
Motif
Other DBs
NCBI-ProteinID:
WDA60052
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All DBs
Position
1564154..1565551
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AA seq
465 aa
AA seq
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MTVTFTREFMLERMFAGDATFDGLFYTGVTSTGIYCLPSCRARKPLAGNVVFHPCAASAR
AAGLRACRRCQPDAFQAGVPVEEATFTAALARVDVPGVLSVQALARELNLSGSALHRLFR
EQFQCSPADWLTRRRVELAAAHLLTSADTAAQVAFAVGFGSLSAFGAQFRRVMHLTPQAL
RVAVRTGTLRLTLPAAYPLELVRRDLGRDPLSVTGQVREGAVQYAWTLPGGPQVVTVQFG
DQEARVQPSCPETLSGPDWLALHTLTVRALGLRGLSRPVPLVPDLFDGLVWAVVGQQVTF
RQACTLRRRLVERCGPPAGDGLSAPPTAQAVAALTPAELGSLGLTGARAALLHRLAGRVS
RGEVNLAALARGTVGAARRTLLAVPGIGLWTAEYVLLRVLGFPDIVPGTDAALAAALRRA
HGLPARPTPAEVQRLLDPFAPHRSHAVLRLWHALPPTHDPHGDTP
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgacggtcacgttcacgcgggaattcatgctggagcggatgttcgcgggtgacgcgacg
ttcgacgggctgttctacacgggcgtgacgagtaccgggatctactgcctgccgtcctgc
cgggcgcgcaagccgctggcggggaacgtggtgttccacccgtgcgcggcgtcggcgcgg
gcggcgggactgcgggcgtgtcgtcgctgccagccggacgcgttccaggcgggcgtgccg
gtcgaggaggcgaccttcacggctgcgctggcccgagtggacgtgccgggcgtcctgtcc
gtgcaggcgctggcccgcgagttgaacttgagtggcagcgcgctgcaccgcctgttccgt
gagcagttccagtgcagtccggccgactggctgacgcggcggcgggtggaactggcggcc
gcgcacctgctgacctcggcggacacggcggcgcaggtggcgttcgcggtggggttcggg
agcctgtcggcgttcggcgcgcagttccggcgggtgatgcacctgaccccgcaggccttg
cgcgtggcggtccggacgggcacgctgcggctgacgctgccggccgcgtacccgctggaa
ctggtgcgccgcgacctgggccgcgatccgctcagcgtgacggggcaggtgcgggaaggt
gcggtgcagtatgcgtggacgctgccgggcgggccgcaggtcgtgaccgtgcagttcgga
gatcaggaggcccgggtgcagccgtcctgtccggagaccctgagcggtccggactggctg
gccctgcacacgttgacggtgcgggcgctgggcctgcgcggactgtcgcggcctgttccg
ctggtgccggacctcttcgacgggctggtgtgggccgtggtgggccagcaggtcacgttc
cggcaggcctgcacgctgcggcggcgactggtggaacgctgcggcccacccgccggggac
ggcctgagcgcgccgcccaccgcgcaggccgtggcggccctgacccccgccgaactgggc
agcctgggcctgaccggagcgcgggccgcgctgctgcaccgcctggccggacgggtctcg
cgtggggaggtgaacctcgcggcgctggcacgcggcacggtgggagccgctcgccgcacc
ctgctggccgtgcccggcatcggcctgtggaccgccgagtacgtgctgttgcgcgtgctg
ggcttcccggacatcgtgcccggcacggacgccgccctggccgccgcgctgcgccgcgcg
cacgggctgcccgcacgcccgacgcccgcagaggtgcagcgcctgcttgaccccttcgcc
cctcaccgcagtcacgcggtcctgcgcctgtggcacgccctgccacccacccacgaccct
cacggagacaccccatga
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