Deinococcus aquaticus: M8445_08735
Help
Entry
M8445_08735 CDS
T08867
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
daqu
Deinococcus aquaticus
Pathway
daqu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
daqu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
M8445_08735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
daqu03021
]
M8445_08735
03400 DNA repair and recombination proteins [BR:
daqu03400
]
M8445_08735
Enzymes [BR:
daqu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
M8445_08735
Transcription machinery [BR:
daqu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
M8445_08735
DNA repair and recombination proteins [BR:
daqu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
M8445_08735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RPOC_hybrid
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Peptidase_M23
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
WDA57455
LinkDB
All DBs
Position
complement(1798448..1803094)
Genome browser
AA seq
1548 aa
AA seq
DB search
MKDFSKVRIAIASPEKIREWSFGEVEKPETINYRTLKPEREGLFDERIFGPQKDYECACG
KYKRQRYEGKVCERCGVEVTSSKVRRYRMGHIDLATPAAHIWYVKDTPSKIGTLLDLSAG
QLEKVLYFSSFLVTTPRNAQKDGRPLKRGELLSDDEYRELRFGRQETYALTGGIEADIRD
GEYVTRGQVLGGTVVSKMDGLAQYRFPRRAVIAYAEEVEASLPLPADALVEQETFRAGEI
LAELEADVTLTAPVDGTVFLHEMGEDSVMVEIRETLAAAPTAEDEEEAAAPMGEVLSRVY
VPHGMNVQVVHGEIIEAGTVLADAASGTRLRVSRDSRLSAVTFPKKKGDVTVTAHWTRRA
EHGIQPQMHVLVGDGSDVRRGQKIIGAIDKEEEVIAQADGVITLHNPASIIVSKAKVYTY
DDEPLVVNGDRVEPGDELADGGNLQSDISGRIEIDLVRKQVRVIESYDFEAKMGAEAVKE
LLDDLNLDELEVELNEMMKDSSRHKRAKARKRLEVTRAFKRSGNHPSWMILNTVPVMPPD
LRPMVQVDGGRFATSDLNDLYRRLINRNNRLKKLMGQGAPDMIIRNEKRMLQEAVDALID
NGRRGSPVTNPGSDRSLRSLTDLLGGKQGRFRQNLLGKRVDYSGRSVIVVGPQLKLHQCG
VPKRMALELFKPFLFKVLEEKGEVTNIKQARKMLERYRDTRDSVWDALEEVIEDKVVLLN
RAPTLHRLGIQAFEPVLVEGQSIQLHPLVCEAFNADFDGDQMAIHVPLSAQAQAEARIQM
LSAHNLLSPANGEPNVKPSRDIILGIFTLTLLRTDNLGAGSEFSSEQDALAALDAGKIAL
NSSVTVNGRETSAGRLKYVFSNPDEAIMAVNRGTIDHQDFVRIRLNGVTYDTSAGRVMFR
RIVQEALGTQAALVDTLVNLETAYEKDHLKDMIMACFKHLGIEATAGLLDGLKDAGFKLS
TTSGITIGIDDIVIPPAKTEILAEADAKVAEIEQNFEFGFMTEEERYKQVVQLWNDTKDE
VKNAMFDNFGKNYPFNPLWIMSLSGARGNAQQITQLAGMRGLMARPDGSTIEVPIRASFR
EGLSVLEYFISTHGARKGGADTALRTADSGYLTRKLVDVAHEVVVRDVDCGTTDYTSIPL
GAVDERTGEWRSRKASEIETSIYGRTLTDAVEIDGRTIEADAMLSLEDVKAITKNAKVLQ
SVFVRTPLNCRVKSGVCQKCYGYDLSQAKPVSMGEAVGVVAAESIGEPGTQLTMRTFHTG
GVAGSGGGDITMGLPRVIELFEARKPKTSAAVADRDGTVRIEEEEERYLVRIEADDDQYS
SKTATKISKSLRMIVKDGDRVEAGQPLTRGAINPHDLLLYKDTDAAQRYLVEEVQRVYRS
QGVKVHDKHIEVIVRQMLRWVEITDGGDTELLEGQTVERWEVDQANDLLEEGQTPSSWKP
VLLGITKSSLTTKSWLSAASFQHTTHVLTEASMKGQVDDLIGLKENVILGKLIPAGTGLQ
TVRDMQVADDRTLEKYGENNTSSDSVTGDRSYDDTRPGVVNDNVTYTN
NT seq
4647 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatttcagcaaagttcgtatcgccatcgccagcccggagaaaatccgcgagtgg
tcgttcggtgaggtcgagaaacccgaaaccatcaactaccgcaccctgaaacccgagcgt
gaaggtctgttcgacgagcgcatcttcgggccgcagaaggactatgagtgcgcctgcggg
aagtacaagcgccagcgctacgagggcaaggtctgcgagcgctgcggtgtggaagtcacg
agcagcaaggtccgccgctaccgcatgggtcacatcgacctggccacgcccgccgcgcac
atctggtacgtgaaggacacgcccagcaagatcggcacgctgctggacctgagcgccggt
cagctggagaaggtgctgtacttcagctccttcctggtcaccacgccccgcaacgcccag
aaggacggccgcccgctcaagcgcggcgagctgctcagcgacgacgagtaccgcgaactg
cgcttcggccgtcaggaaacctacgccctgaccggcggtatcgaggcggacatccgtgac
ggcgagtacgtcacgcgcggccaggtgctgggcggcacggtcgtcagcaagatggacggc
ctggctcagtaccgcttcccgcgccgcgccgtgatcgcgtacgccgaggaagtggaggcc
agcctgccgctgcccgccgacgcactggtcgagcaggaaaccttccgcgccggtgagatc
ctggcggaactggaagccgacgtgacgctgaccgctccggtcgacggcaccgtgttcctg
cacgagatgggcgaggacagcgtcatggtcgagattcgcgagaccctggccgccgcgccc
accgccgaagacgaggaagaggccgccgcgcccatgggcgaggtcctgagccgcgtgtac
gtgcctcacggcatgaacgtgcaggtcgtgcacggcgagatcatcgaggcgggcaccgta
ctggccgacgccgcgagcggcacgcgcctgcgcgtcagccgtgacagccgcctgagcgcc
gtcaccttccccaagaagaagggtgacgtgaccgtcaccgcgcactggacccgccgcgct
gagcacggcatccagccgcagatgcacgttctggtcggggacggcagcgacgtccgccgt
ggccagaagatcatcggagccatcgacaaggaagaggaagtcatcgcgcaggccgacggc
gtcatcaccctgcacaaccccgccagcatcatcgtcagcaaggccaaggtctacacctac
gacgacgagcccctcgtcgtgaacggcgaccgcgtcgagcccggcgacgaactcgccgac
ggtggcaacctccagagcgacatcagcggccgcatcgagatcgacctggtgcgcaagcag
gtccgcgtgatcgagtcgtacgacttcgaagcgaagatgggcgccgaggccgtcaaggaa
ctcctggacgacctgaacctcgacgagctggaagtcgaactgaacgagatgatgaaggac
tccagccgccacaagcgcgccaaggcccgcaagcgcctggaagtgacccgtgcgttcaaa
cgcagcggcaaccaccccagctggatgatcctgaacaccgtgcccgtcatgcccccggac
ctgcgtccgatggtgcaggtggacggcggccgcttcgcgaccagcgacctgaacgacctg
taccgccgcctgatcaaccgcaacaaccgcctgaagaaactgatgggccagggcgcgccg
gacatgatcatccgcaacgagaagcgcatgcttcaggaagcggtggacgccctgatcgac
aacggccgccgcggcagccccgtcaccaaccccggttccgaccgctcgctgcgttccctg
accgacctgctcggcgggaaacagggccgcttccgtcagaacctgctgggtaagcgcgtg
gactactccggccgctcggtgatcgtggtcggcccgcagctgaaactgcaccagtgcggt
gtgcccaagcgcatggcgctcgaactcttcaagccgttcctgttcaaggtccttgaagag
aagggcgaggtcacgaacatcaagcaggcccgcaagatgctcgaacgctaccgcgacacc
cgcgacagcgtctgggacgccctggaagaggtcatcgaggacaaggtcgtgctgctcaac
cgcgcgcccaccctgcaccgactgggcatccaggctttcgagcccgtgctggtcgagggt
cagagcatccagctgcacccgctggtctgtgaagccttcaacgccgacttcgacggcgac
cagatggccatccacgtccccctgagcgcccaggcgcaggccgaagcgcgcatccagatg
ctcagcgcgcacaacctgctgtcccccgcgaacggcgagccgaacgtcaagcccagccgc
gacatcatcctggggatcttcacgctgaccctgctgcgcaccgacaacctcggcgcgggc
agcgagttcagcagcgagcaggacgccctggccgcgctggacgctggcaagatcgcgctg
aatagctcggtcaccgtgaacggcagggaaaccagcgccggacgcctgaagtacgtcttc
agcaacccggatgaggccatcatggccgtcaaccgcggcaccatcgaccaccaggacttc
gtgcgcatccgcctgaacggcgtgacgtacgacaccagcgcgggccgcgtgatgttccgc
cggatcgtgcaggaagccctgggcacccaggccgccctggtcgacaccctcgtgaacctg
gaaacggcgtacgagaaagaccacctgaaagacatgatcatggcgtgcttcaaacacctc
gggatcgaggcgaccgccggcctgctcgacggcctgaaagacgcgggcttcaagctctcc
acgacctccggcatcaccatcggcatcgacgacatcgtcatcccgcccgccaagaccgag
atcctggccgaagcggacgccaaggtcgccgagatcgagcagaacttcgagttcggcttc
atgaccgaggaagagcgctacaagcaggtcgtgcagctctggaacgacaccaaggacgaa
gtcaagaacgccatgttcgacaacttcggcaagaactaccccttcaaccccctgtggatc
atgagcctctcgggtgcccgtggtaacgcgcagcagatcacgcagctcgccgggatgcgc
ggcctgatggcccgccccgacggcagcaccatcgaagtgccgatccgcgccagcttccgc
gagggcctgtccgtgctggagtacttcatcagcacccacggcgcgcgtaagggtggggcc
gacaccgcgctgcgtaccgccgactccggctacctgacccgtaagctggtcgacgtggcc
cacgaagtcgtcgtgcgcgacgtggactgcggaaccaccgactacacctccatcccgctg
ggcgccgtggacgagcgcacgggcgaatggcgcagccgcaaggccagcgagatcgaaacc
agcatctacggccgcaccctgaccgacgccgtggaaatcgacggccgcaccatcgaagcc
gacgccatgctgtccctggaagacgtcaaggcgatcaccaagaacgccaaggtcctccag
agcgtgttcgtgcggaccccgctgaactgccgcgtcaagagtggcgtgtgccagaagtgc
tacggctacgacctctcgcaggccaagcccgtcagcatgggtgaagcggtcggcgtggtc
gccgccgaatccatcggggaacccggcacgcagctcaccatgcgtaccttccacaccggt
ggggtcgccggcagcggcggcggtgacatcaccatgggtctgccccgcgtgatcgaactg
ttcgaggcccgcaagcccaagacctcggcggccgtggccgaccgtgacggcaccgttcgc
attgaggaagaggaagaacgctacctcgtgcgcatcgaggccgacgacgaccagtacagc
agcaagaccgccaccaagatcagcaagagcctgcgcatgatcgtcaaggacggcgaccgc
gtcgaggccggtcagccgctcacgcgcggcgccatcaacccccacgacctgctgctgtac
aaggacacggacgccgcccagcgctatctggtggaagaagtgcagcgcgtgtaccgcagc
cagggcgtgaaggtccacgacaagcacatcgaagtgatcgtgcgccagatgctccgctgg
gtggaaatcaccgacggcggcgacaccgaactgctcgaagggcagaccgtggaacgctgg
gaagtcgatcaggccaacgacctgctcgaggaaggccagacgcccagctcctggaagccc
gtcctgctgggcatcaccaagagcagcctgaccaccaagagctggctgtccgccgcgagc
ttccaacacaccacgcacgtcctgaccgaggccagcatgaagggccaggtcgacgacctg
atcggcctgaaggaaaacgtcatcctcgggaaactgattcccgctgggaccggccttcag
accgtgcgcgacatgcaggtcgccgacgaccgcacgctcgagaagtacggcgagaacaac
accagcagcgactccgtcaccggggaccgcagctacgacgacacccgcccgggcgtcgtg
aacgacaacgtcacgtacaccaactga
DBGET
integrated database retrieval system
