Deinococcus aquaticus: M8445_09095
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Entry
M8445_09095 CDS
T08867
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
daqu
Deinococcus aquaticus
Pathway
daqu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
daqu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
M8445_09095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
daqu03400
]
M8445_09095
Enzymes [BR:
daqu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
M8445_09095
DNA repair and recombination proteins [BR:
daqu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
M8445_09095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
UvrD_C_2
Viral_helicase1
SH3_13
OB_YrrC
AAA_11
HHH_5
nSTAND3
TraI_hel_assoc_N
AAA_25
AAA_28
AAA_16
AAA_22
AAA
PhoH
NTPase_1
Helicase_RecD
NPHP3_N
KTI12
AAA_18
Motif
Other DBs
NCBI-ProteinID:
WDA57518
LinkDB
All DBs
Position
1872517..1874652
Genome browser
AA seq
711 aa
AA seq
DB search
MSFASPAETFRVSGGVNRVRFRSDSGFTVMTARIRNEEGEDPDATVIGVMPPLEAGDTFS
ADVSMEEHREYGYQYRVLNLVLEAQPTDLTEAGIAAYLEARVGGVGKVLAGRIAGMFGAA
TFDILENDPDRLLQVPGVTASTLHKMTSSWSQQGLERRLLAGLQGLGLSISQAQRVVKHF
GEAALERLQADLFVLTEVEGIGFLTADKLWQAQGGTLDDPRRLTAAAVYALQQAAQQGGH
SFLPRARAERGVAHYTRVTPAQARLAVETAVELGRLSDDTPPLLDTQDALHDASRIYLPP
TLRAEKKLAGLIRTLIATPPAGDEWIVPNGAAKGLSSEQAGVLDLLAEHRLVVLTGGPGT
GKSTTTRAVADLAESLGLEVGLCAPTGKAARRLGEVTGRSASTIHRLLGYGPAGFRHNHL
EPAPYDLLIVDEVSMCGDGLMLSLLSAVAPGARVLLVGDTDQLPPVDAGLPLHALTQTAP
TVRLTQVYRQAAENPIIRAAHGLLEGQAPQWGDPRLNITETEPDVGARRVALLVRDLGGP
TQVQVLTPMRKGPLGVDMLNHHLQGLFNPGEGGVRIADAHARPGDVVVQTKNDYTNEVFN
GTVGTVLKADGSRLTVDFDGNIVELAGAELFNLQLGYALTVHRAQGSEWGTVLGVLHEAH
MPMLSRNLVYTALTRARERFFAVGSGSAWQRAAGRQREERHTALLERIRAR
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtttgcctctcctgccgagactttccgcgtgtctggcggtgtgaacagggtgcgt
ttccgttcggattcgggcttcacggtcatgaccgcccgcatccgcaacgaggagggcgag
gacccggacgccaccgtgatcggcgtcatgccgcccctggaggccggggacaccttcagc
gccgacgtgtccatggaagagcaccgcgagtacgggtatcagtaccgcgtgctgaacctc
gtgctggaagcccagccgaccgacctgaccgaggcgggcatcgccgcgtacctcgaggcg
cgggtgggcggcgtgggcaaggtcctggcgggccgcatcgccgggatgttcggcgcggcg
accttcgacatcctggaaaacgacccggaccggctgttgcaggtgccgggcgtgacggcc
agcacgctgcacaagatgacgtccagctggtcgcagcagggcctggaacgccgcctgctg
gccggactgcagggcctgggcctgagcatctcgcaggcgcagcgggtcgtgaagcacttc
ggagaggcggcgctggaacgcctgcaagcggacctgttcgtgctcaccgaggtcgagggg
atcggctttctcaccgccgacaagctgtggcaggcgcagggcggcacgctggacgacccg
cgtcgcctgacggccgccgccgtgtacgccctgcagcaggccgcgcagcagggcgggcac
tcgttcctgccgcgcgcccgcgcggagcggggcgtggcgcactacacccgtgtgaccccc
gcccaggcgcggctggccgtggagaccgccgtggaactgggccgcctgagcgacgacacg
cccccgctgctggacacgcaggacgcgctgcacgatgccagtcgcatctacctgccgccc
accctgcgcgccgagaagaaactcgcgggcctgatccgcacgctgatcgccacgcccccc
gccggggacgagtggatcgtcccgaacggtgcggcaaagggcctgtcctccgaacaggca
ggcgtgctggacctgctcgccgagcaccggctggtcgtcctgaccggcggccccggcacc
ggcaagagcaccaccacccgcgccgtcgctgaccttgctgagagcctgggcctggaagtc
ggcctgtgcgccccgaccggcaaggccgcccgccgcctgggcgaggtgacgggccgcagc
gccagcaccattcaccgcctgcttgggtacggcccggcgggcttccggcacaaccacctg
gaacccgccccgtacgacctgctgatcgtcgatgaggtcagcatgtgcggcgacggcctg
atgctctcgctgctctcggcggtcgcgccgggcgcgcgggtgctgctggtgggcgacacc
gaccagctgccccccgtggacgccgggctgcccctgcacgccctgacgcagaccgcgccc
accgtgcgcctgacccaggtgtaccggcaggcggccgagaaccccatcatccgcgccgcg
cacggcctgctggaaggacaggctccgcagtggggcgacccccggctgaacatcacggaa
accgaaccggacgtcggcgcccggcgcgtggccctgctggtgcgcgacctgggcggcccc
acgcaggtgcaggtcctgacgcccatgcgcaagggaccgctgggcgtggacatgctcaac
caccacctgcagggcctgttcaaccccggcgagggcggcgtgcgcatcgccgacgcgcat
gcccggcccggcgacgtggtcgtgcagaccaagaacgactacaccaacgaggtcttcaac
ggcacggtcggcaccgtcctgaaagccgacgggtcccgcctgaccgtggatttcgatggg
aacatcgtggaactcgccggggcggaactgttcaacctgcaactcgggtacgcgctgacc
gtgcaccgcgcgcagggcagcgagtggggcaccgtgctgggcgtactgcacgaggcgcac
atgcccatgctgagccgcaatctggtgtacaccgccctgacccgcgcccgcgaacgcttc
ttcgcggtggggtccggcagcgcgtggcagcgggccgccggccggcagcgtgaggagcgg
cacacggcgctgctggaacgcatccgcgcccgctga
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