Deinococcus aquaticus: M8445_11925
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Entry
M8445_11925 CDS
T08867
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
daqu
Deinococcus aquaticus
Brite
KEGG Orthology (KO) [BR:
daqu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
daqu03016
]
M8445_11925
Enzymes [BR:
daqu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
M8445_11925
Transfer RNA biogenesis [BR:
daqu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
M8445_11925
Prokaryotic type
M8445_11925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
LytR_C
Motif
Other DBs
NCBI-ProteinID:
WDA58049
LinkDB
All DBs
Position
complement(2452619..2453710)
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AA seq
363 aa
AA seq
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MVGSIVSLVFDWSALRALTEGPGTGGTLRQEPGDFRVDEVPLYVPSGEGEHLYLQFEKTG
HTTAHVLRELGEQVGVRDREVGVAGLKDRHAVTTQWISLPQKYEARVQNFALDGVRVLQL
TRHGNKLGMGHLRANRFSVRVRDAAGHAGQAGQTLELLAAQGVPNYFGPQRFGLGGLNAE
EGLRVVRGESRVRDPRVRRFLTTALQSVVFNGFVNLRLERGVFTGLLAGDMAKKHDTGGV
FQVEDAEQESPRAARGEVSATGTLFGKKVKPLTLDAGALEQEALSALGLSADLFSSRKGD
RRLTRVFPEDVSVSPEDDGFTVSFTLPRGSFATSVLREIMKTDVDAASPLLPDDEAGDLE
DAE
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atggtgggcagcatcgtgagtctggtgtttgactggtcggcgctgcgggcgctgacggaa
ggcccgggaaccggcggaacgctccgtcaggaacccggtgatttccgtgtggatgaagtg
cctctgtacgtgccgtccggtgagggcgagcacctgtacctgcagttcgagaagaccggg
cacacgaccgcgcacgtgctacgcgaactcggtgagcaggtcggcgtgcgtgaccgcgag
gtgggcgtggctggcctgaaggaccggcacgccgtgaccacccagtggatcagcctgccg
cagaagtacgaggcgcgcgtgcagaacttcgcgctggacggcgtgcgggtgctgcaactg
acccggcacgggaacaagctgggcatggggcacctgcgtgccaaccgcttctcggtgcgg
gtaagggacgcggcgggccacgccgggcaggccgggcagacgctggagctgctggcggcg
cagggcgtgccgaattacttcgggccgcagcggttcgggctgggtggcctgaacgccgag
gagggcctgcgggtcgtgcggggcgagtcgcgcgtgcgtgacccgcgcgtgcgacggttc
ctgacgacggcgctgcagagcgtggtgttcaacgggttcgtgaacctgcgcctggaacgc
ggggtgttcacgggcctgctggccggggacatggccaagaaacacgatactggcggcgta
tttcaggtcgaggacgccgagcaggaatctccgcgtgcggcgcggggcgaggtcagcgcg
accggcacgctgttcggcaagaaggtcaagcccctgacgctggacgccggggcgctggag
caggaggcgctgtcggcgctgggcctgtccgccgacctgttctcgtcgcgcaagggcgac
cgccgcctcacgcgcgtgttccccgaggatgtcagcgtgagtcccgaggacgacggcttc
acggtgtcgttcacgttgccgcgcggcagtttcgccaccagcgtgctgcgggaaatcatg
aaaaccgacgtggacgccgcctctcccctgctacccgacgacgaagcgggcgacctggag
gacgccgagtga
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