Deinococcus aquaticus: M8445_14040
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Entry
M8445_14040 CDS
T08867
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
daqu
Deinococcus aquaticus
Pathway
daqu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
daqu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
M8445_14040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
daqu03400
]
M8445_14040
DNA repair and recombination proteins [BR:
daqu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
M8445_14040
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
M8445_14040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
UvrA_DNA-bind
nSTAND1
DnaJ_CXXCXGXG
AAA_29
AAA_25
AAA_16
DUF4350
RsgA_GTPase
Viral_helicase1
DUF463
Motif
Other DBs
NCBI-ProteinID:
WDA58450
LinkDB
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Position
complement(2904060..2906648)
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AA seq
862 aa
AA seq
DB search
MNDLPSSSRDGSPRDDRPRDGFVQVRGAREHNLKNVDVDLPRDALVVFTGVSGSGKSSLA
FGTLYAEAQRRYLDSVSPYARRLFNQLGTPDVDRIDGLPPAVALQQGRGVTSARSSVGSL
TTLNNVLRLLYSRAGDYPAGQGIIYAEGFSPNTPEGACPECHGLGRVFAVTEESMVPDPS
LTIRERAVAAWPTAWAGQNQRDILVTLDYDVDTPWQDLPREARDWILFTDEQPQVPVYPG
LTPEETRRAVKRRAEPSYLGTFTSARRHVLHTFANSGSESMKRRAASFMVIRECPVCHGK
RLTRAALGVTFAGLDIMEFSRLPLRRAAELLAPAAAGQTARPDGTPRPPEEALALTRLAA
DLCARVDVLERLGLGYLTLERGTPTLSPGELQRLRLATQLYSNLFGVVYVLDEPSAGLHP
ADTEALLGALDRLKAGGNSLFVVEHEPGVIRHADWIVDVGPHAGQHGGQVLYSGPPAGLR
DVPDSLTARHLFGPPAPLLGVRRDPTGWLDLRGVTRNNLSGVDVRLPLGVLTAVTGVSGS
GKSSLITQALADLLGAHLGREIAPVEAGADPADLLTADDAPAPTQGTLGGDVGRVRRLVQ
VTQAPIGRTPRSNLATYTGLFDHVRRLFAATPLARERRYSAGRFSFNVKGGRCEHCQGEG
FVTVELLFLPSVYAPCPVCHGTRFKAATLEVTWNGLNIAQVLNLTVDAAAQVFADEAPVH
RALSTLQEVGLGYLRLGQPATELSGGEAQRVKLATELQKAVRGHTVYLLDEPTTGLHPSD
VERLGAQLRRLVDAGHTVMVVEHDLGVIAASDWVVDLGPGAGEEGGQIVAQGTPEQVARA
SGSRTAPYLRRELDGRAQPAPT
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaccttccatcctcctctcgcgacggctccccgcgcgacgaccggccgcgcgac
gggttcgtgcaggtgcgcggcgcgcgggagcacaacctgaagaacgtggacgtggacctg
ccccgcgacgcgctggtggtgttcacgggcgtgtcggggtccgggaagtcctcgctggcg
ttcgggacgctgtacgccgaggcgcagcgccgctacctggattccgtgtcgccgtacgcg
cggcggctgttcaatcagctgggcacgccggacgtggaccgcatcgacggcctgccgccc
gccgtggcgttgcagcaggggcggggcgtcacgtcggcgcgcagcagtgtgggcagcctg
accaccctgaacaacgtgctgcgcctgctgtactcccgcgcgggggactacccggcgggg
cagggcatcatctacgccgaggggttctcgccgaacacgccggagggcgcctgcccggaa
tgccatgggctgggccgcgtgttcgccgtgaccgaggagagcatggtcccggacccgtcc
ctgaccatccgcgagcgggccgtggcggcgtggccgaccgcgtgggccgggcagaaccag
cgcgacattctggtcacgctggactacgacgtggacaccccctggcaggacctgccgcgc
gaggcccgcgactggattctgttcacggacgagcagccgcaggtgccggtgtacccgggt
ctgacgcccgaggagacgcgccgggccgtgaaacgccgcgccgagccgtcgtacctgggc
acgttcacgtccgcgcggcggcacgtgctgcacacgttcgcgaacagcggcagcgagagc
atgaagcgccgggcggcgtcgttcatggtgatccgcgagtgccccgtctgccacggcaag
cggctgacccgcgcggccctgggcgtgacgtttgccgggctggacatcatggagttctcg
cgcctgccgctgcgccgcgccgccgaactgctcgcccccgcggccgccgggcagacggcc
cgcccggacggcactccccgcccgcccgaggaggcgctggctctgacccggctggccgcc
gacctgtgcgcccgcgtggacgtgctggaacgcctgggcctgggctacctgaccctggaa
cgcggcacgcccaccctgtcgcccggcgaactgcaacgcctgcggctggccacgcagctg
tactcgaacctgttcggggtggtgtacgtgctggacgaaccctctgccgggctgcatccc
gccgacaccgaggcgctgctgggcgccctggaccgcctgaaagccggtgggaactcgctg
ttcgtggtggaacacgagccgggcgtgatccgccacgccgactggatcgtggatgtcggc
ccgcatgccgggcagcacggcgggcaggtactgtacagcggtcccccggcgggcctgcgg
gacgtgccggactccctgaccgcccggcacctcttcgggccgcccgcacctttgctaggc
gtgcgccgcgacccgaccggctggctggacctgcgcggcgtgacccgcaacaacctgagc
ggcgtggacgtgcgcctgccactgggcgttctgacggccgtgacgggcgtcagcggctcc
gggaagtccagcctgatcacccaggccctcgcggacctgctgggcgcccacctgggccgc
gagatagccccagtcgaagctggcgccgacccggccgatctgctgactgccgacgacgcc
cccgcccccacgcagggcaccctgggcggcgatgtgggacgcgtgcggcggctggtgcag
gtcacgcaggcacccatcgggcgcacgccgcgcagcaacctcgccacgtacaccggcctg
ttcgaccacgtacgccgcctgttcgccgcgacgcccctggcccgggagcgccgctacagc
gcgggccgcttctcgttcaacgtgaagggcggccgctgcgaacactgccagggcgagggc
ttcgtgaccgtggaactgctgttcctgccgtccgtatatgcgccctgtcccgtctgccac
ggcacccgctttaaagccgccacgctggaggtcacctggaacggcctgaacatcgcgcag
gtgctgaacctcaccgtggacgccgccgcgcaggtgttcgcagacgaggcccccgtccac
cgcgccctgagcacccttcaggaggtcggcctgggctacctgcgcctcgggcagcctgcc
acggaactctcgggcggcgaggcgcagcgcgtgaaactggcgaccgaactccagaaggcc
gtgcgcggccacaccgtgtacctgctggacgaacccaccaccggcctgcaccccagcgac
gtggaacgcctgggcgcgcagctgcgccgcctcgtggacgccgggcataccgtcatggtc
gtcgagcacgacctgggcgtgatcgccgcaagtgactgggtcgtggacctcggccccggc
gcgggagaggagggcggtcagatcgtggcccagggcacccccgaacaggtcgccagggca
agtggcagccgcaccgcaccgtacctgcgccgcgaactggacggacgcgcgcagcccgcc
ccgacctga
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