Dechloromonas aromatica: Daro_0016
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Entry
Daro_0016 CDS
T00259
Name
(GenBank) ribosomal small subunit pseudouridine synthase A
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
dar
Dechloromonas aromatica
Brite
KEGG Orthology (KO) [BR:
dar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dar03009
]
Daro_0016
Enzymes [BR:
dar01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
Daro_0016
Ribosome biogenesis [BR:
dar03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
Daro_0016
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
DNAPKcs_CC5
Motif
Other DBs
NCBI-ProteinID:
AAZ44775
UniProt:
Q47K56
LinkDB
All DBs
Position
20514..21221
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AA seq
235 aa
AA seq
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MQLERILQKHGFGSRRECRGLIRRDRVAVNGQVCDDPFVELDTEGLVFTVDGVDWPYAEF
ATLMLHKPAGYECSRKPKHHAGVLELLPIPLRERDVQPIGRLDEDTTGLLLITNDGQLNH
QLSSAKRKVPKVYLATTKHPLDQAQIDQLVAGVLLADEYEPISAAAAEIVGEKLLRLTLT
EGKYHQVKRMVAAVSNRVEALHREAVGELTLPPDLKPGEWRWLSAADLQKLGYSK
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgcaactagaacgtatcctccaaaagcatggtttcggttcccgcagggaatgccgaggc
ctcatccgccgtgatcgtgtcgcggttaacggccaggtttgcgacgatccttttgtcgaa
ctcgacaccgaaggactggtattcacggtcgatggcgtcgattggccttacgccgaattc
gccacgctgatgctccacaagccggccggctacgaatgctcgcgcaagccaaaacatcac
gccggcgtccttgaactgctgccaattccgttgcgcgaacgcgatgttcagccgatcggc
cgtctcgacgaagacacgaccggcttgctcctgatcaccaatgacgggcagttgaaccac
cagctttcatcggccaagcgcaaggtgccgaaagtctatctggcaaccaccaagcatccg
ctcgatcaggcgcagatcgatcagctggtggcaggtgtgctccttgccgacgaatacgaa
ccgattagcgctgctgccgccgaaatcgttggtgaaaaactgctgcgcctgaccctgacc
gaaggcaagtaccatcaggtcaaacggatggtcgctgctgtcagcaaccgtgtcgaggcc
ctgcatcgtgaagccgtcggcgaactgacgctgccgcctgacctcaaacccggcgagtgg
cgttggttgtcagcggccgacctgcaaaaactgggctattccaaatga
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