Dechloromonas aromatica: Daro_0345
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Entry
Daro_0345 CDS
T00259
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
dar
Dechloromonas aromatica
Pathway
dar03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dar00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Daro_0345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dar03021
]
Daro_0345
03400 DNA repair and recombination proteins [BR:
dar03400
]
Daro_0345
Enzymes [BR:
dar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Daro_0345
Transcription machinery [BR:
dar03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Daro_0345
DNA repair and recombination proteins [BR:
dar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Daro_0345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
AAZ45104
UniProt:
Q47J77
LinkDB
All DBs
Position
378127..379101
Genome browser
AA seq
324 aa
AA seq
DB search
MQSSGLLKPRIIDVQSVSPVQAKVVMEPFERGYGHTLGNALRRILLSSMVGYAPTEVGID
GVLHEYSTVDGVQEDVVDILLNLKGVVFKLHNRDVVNLKLVKEGEGAVRAGDIELPHDVE
IINPEHVIAHLSPGGKLAMEIKVEKGRGYVPGNVRNLGDAKTIGKLVLDASFSPIRRVAY
AVESARVEQRTDLDKLIVDIETNGVVEPEEAIRYAARVLMEQLSVFADLEGTAPVAEASK
PAQVDPVLLRPVDDLELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSLNEIKE
VLAARGLTLGMKLENWPPAGLEKA
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagcagtggacttctcaaaccccgcattatcgacgtgcagagcgtgtcgcctgtg
caagccaaggtggtcatggagccgttcgaacgcggctatggccataccctcggcaacgca
ctgcgccgcattctgctctcctcgatggtcggttatgcaccgaccgaagtcggcatcgac
ggcgtgctccacgagtactccaccgttgatggcgtgcaggaagatgtcgttgatatcctt
ctcaatctgaagggtgtcgtcttcaaattgcacaaccgtgacgtggttaacctcaagctg
gtcaaggaaggcgaaggcgccgtccgtgctggcgatatcgagttgccccacgacgtcgag
atcatcaatccggaacatgtgatcgctcacctctctcctggtggcaagcttgccatggag
atcaaggtcgagaagggtcgcggctacgtgccgggtaacgtccgtaacctgggcgatgcc
aagaccatcggcaagctggttctggacgcttcgttcagcccgatccgtcgcgttgcttac
gcggtcgaaagtgcccgcgttgaacagcgtaccgatctggacaagctgattgttgatatc
gaaaccaatggtgttgtcgagccggaagaagccattcgctacgctgctcgcgtgctgatg
gaacaactttccgtgtttgccgacctggagggtaccgctcctgtggccgaggcttccaag
ccggctcaggttgatccggttctgctccgcccggttgatgacctcgagctgacggttcgt
tccgcgaactgcctgaaggccgagaatatctactacatcggcgatctgatccagcgtacc
gagaatgaacttctcaagaccccgaatctgggtcgtaagtcactgaatgagatcaaggaa
gttttggccgcacgcggtttgacgctcggcatgaaactggaaaattggccgcccgccggt
ctggaaaaggcgtaa
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