Dechloromonas aromatica: Daro_0868
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Entry
Daro_0868 CDS
T00259
Name
(GenBank) tRNA pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
dar
Dechloromonas aromatica
Brite
KEGG Orthology (KO) [BR:
dar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dar03016
]
Daro_0868
Enzymes [BR:
dar01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Daro_0868
Transfer RNA biogenesis [BR:
dar03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Daro_0868
Prokaryotic type
Daro_0868
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
WVELL
Motif
Other DBs
NCBI-ProteinID:
AAZ45624
UniProt:
Q47HQ7
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All DBs
Position
941143..941931
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AA seq
262 aa
AA seq
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MRVALGIEYCGTGFHGWQSQAGGGTVQDALEAALGEVAGVPVGVLCAGRTDAGVHATHQV
AHFDAPVDRPLTAWVRGVNSHLPEGVAVRWAQPVAEDFHARFSARGRRYRYLLLNRPQRP
GLWQGRVGWFHWPLELEAMQEACLRLLGEHDFSAFRAANCQAKSPVKHMSRAEVRQCGNM
FVFDFEASAFLHHMVRNLVGTLVYIGKGTQQPDWIEALLQTKDRKLAAPTFSPDGLYFRG
PVYEPHWGLPDPNDDFLDGMLK
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
gtgagagttgcgttggggattgaatactgcggtaccgggttccatggctggcagagtcag
gccggcggtgggacggtgcaggatgcattggaagcggcgttgggcgaagttgccggtgtg
ccggttggtgtgctctgcgcggggagaaccgatgccggggtccatgcaacccatcaggtt
gcccatttcgatgcgccggttgatcgtccgctgaccgcatgggtgcgcggggttaattcg
catttgccggaaggcgtggccgtgcgttgggcgcagccggtggcagaagattttcacgcc
cgcttcagtgcccgaggccggcgctatcgttatctgctgcttaatcgtccgcagcgccct
ggattgtggcaaggacgggtgggctggtttcactggccgctggagctggaagcgatgcag
gaggcctgtcttcggctgctcggcgagcatgatttttctgctttcagggcggcaaattgt
caggccaagtcaccggtcaagcacatgtcgcgggctgaggtgcgccagtgcggcaacatg
tttgtttttgatttcgaggccagtgccttcctgcatcacatggtgcgcaatctggtcggt
acgctggtctatattggcaagggtacgcagcagccagactggatcgaagcgcttctgcag
acaaaggatcgtaaactggcagcgcctaccttttcgccggatggtctgtatttccgtggg
ccggtttacgaaccgcactggggattgcctgatccgaatgacgatttcctcgatggaatg
ttgaaatga
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