Dechloromonas aromatica: Daro_1129
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Entry
Daro_1129 CDS
T00259
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
dar
Dechloromonas aromatica
Brite
KEGG Orthology (KO) [BR:
dar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dar03009
]
Daro_1129
Enzymes [BR:
dar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
Daro_1129
Ribosome biogenesis [BR:
dar03009
]
Prokaryotic type
rRNA helicases
Daro_1129
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
P-loop_SecA
CMS1
AAA_22
Cas3-like_C_2
YlmH_RBD
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
AAZ45885
UniProt:
Q47GZ6
LinkDB
All DBs
Position
1235629..1237029
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AA seq
466 aa
AA seq
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MSEDTTAGQSFDTLPLSPAMLANLAQLEYLSMTPIQAASLPLALAGNDLIAQAKTGSGKT
AAFGLALLNRLNTSRFAVQAMVLCPTRELADQVTQEIRRLARFEENIKVLSLVGGSTLRN
QANSLEKGVHIVVGTPGRIMDHMERGYLKLDELNTLVLDEADRMLDMGFHDDIAYVAKRC
PAQRQTLLFSATYPEGIALLARQFLRQPKEVKLLELHEETKIRQRFYEVKDDERLDAVVR
LLKHYRPVSTLAFCNTKQQCRDLVNVLRHAGIHALTLNGDLEQRERDQVLIQFANRSCSV
LVATDVAARGLDIDQLEAVINVDVTPDPEIHIHRIGRTGRGDEEGWALSLCSSGDRRRVA
TIAEMMKCKLDVLDLKTVEVTDDSPLVPPMSTLLMLGGRKDKIRPGDVMGALAGEAGLTR
EQVGKITVTDQSTYVAVARAVAKETVRKLSAGKVKGKTVKVRILTN
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagacaccaccgcaggccaaagttttgacacgctaccgctgtcgccggccatg
ctggccaatctggcgcagcttgaatacttgagcatgacgcctatccaggcggccagcctg
cccctggcgctggccggcaatgatctgatcgcccaagccaagactggtagcggcaagacc
gccgcctttggtcttgccttgctcaatcgcctgaacaccagtcgtttcgccgtgcaggcc
atggtgctgtgcccgacccgtgaactggccgatcaggtgacgcaggaaatccggcgtctg
gcccgttttgaagagaacatcaaggtgttgtcgctggttggtggctcaacgctgcgcaat
caggcgaacagcctggaaaaaggcgtccacatagtcgttggcacgccaggtcgcatcatg
gaccacatggagcgcggctacctgaagctcgacgaattgaacacgctggtccttgacgaa
gccgaccgcatgctcgacatgggcttccatgatgacattgcttacgtcgccaagcggtgc
ccggcgcagcgccagacgctgttgttctcggcgacctatccggaaggcatcgccctgctg
gccaggcagtttttgcgtcagcccaaggaagtcaaactccttgagctgcatgaggaaacc
aagattcgccagcgcttttacgaggtcaaggacgacgagcgcctcgatgccgtggtgcgc
ctgctcaagcattaccgtccggtcagcacgctggcgttctgcaataccaagcagcagtgt
cgtgatctggtcaatgtcctgcgccacgccggcattcatgcgctgacgctgaatggcgat
ctggagcaacgcgagcgcgatcaggtgctgatccagttcgccaaccgcagttgctcggtg
ctggtggcgaccgacgttgcggcgcgcggcctggatatcgatcagcttgaagcggtgatc
aatgttgatgtgacacccgatccggaaatccacatccaccgtatcggccggaccggccgt
ggtgatgaagagggctgggcgttgagtctgtgcagttccggcgaccgccgccgggtggcg
acgatcgccgagatgatgaagtgcaagctcgacgtgcttgatctgaaaaccgtggaagtc
accgacgattcgccgctggtgccgccgatgtcgacattgctgatgctcggcgggcgcaag
gacaagattcgtcccggcgacgtgatgggcgcgctggctggcgaggctggcctgacccgc
gagcaggtcggcaagatcacggtaactgaccagagcacctatgtggccgtagcgcgtgct
gtggccaaggagacggtgcgcaagctgtcggccggcaaggtcaagggcaagacggtcaag
gttcgcatcctgaccaattga
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