Dechloromonas aromatica: Daro_1919
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Entry
Daro_1919 CDS
T00259
Name
(GenBank) SMC protein, N-terminal
KO
K03546
DNA repair protein SbcC/Rad50
Organism
dar
Dechloromonas aromatica
Brite
KEGG Orthology (KO) [BR:
dar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dar03400
]
Daro_1919
DNA repair and recombination proteins [BR:
dar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Daro_1919
Archaeal homologous recombinant proteins
Daro_1919
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
ABC_tran
cobW
RsgA_GTPase
AAA_21
nSTAND3
NTPase_1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AAZ46665
UniProt:
Q47ER6
LinkDB
All DBs
Position
complement(2060463..2063930)
Genome browser
AA seq
1155 aa
AA seq
DB search
MKILSLRLKNLNSLKGEWTIDFTKAPFTDNCLFAITGPTGAGKSTLLDAICLALYHQTPR
LKTISATDNDIMTRHTADCLAEVEFEVKGAVYRAFWSQRRARDKIDGALQAPKVELAAGD
GTILSTQTNDKLKRIAEITGLDFPRFTKSMLLAQGGFAAFLNASANERAELLEELTGTEI
YGEISRKVFEQARDAKSQLEQLKARADGMELLSEEQRAAMQAEVTRLDTQLTDTQRRHQQ
TQSQRQWRLDLAQGEQEVKTAEARQQEADAALTAAAPDLKKLADSEPAEALKPLHQQWQQ
ASAACQQTETELKALHAEREKLQAHQLAQHQTASQLSAQVAAQAQQALQQSQREAKQLDD
FCATHPQRAQLGERLGVWRQQFEQRVKLNRDLAAQQQAQQKLEQEIAETARQSATQASAV
ASAEKAKTTADAALEKTQTEQNLRLAGQTLAELRQHWQGEQAGLNRWQQLEALAQRRREL
AVLQTTQATQVQQGEQKIEAQEKALVALREQHKELAAQVADKQKLLEQERRIQSLETHRR
QLQPGEACPLCGAHEHPAIADYAALDVSATETALKEKQALLEALVQKGQQAKTEQAATQA
TQKEWLAQQAKTTQEIARAQAEWTEFLAGLSSETPLATDAWQEAQTLASARNAAEQALAK
LADRLKAADQGEQALNAARKTATEAAQTLLNASNQLKLLQQTAQTTQLRQTELAKAAQTL
TQERAELDSKLAATLTDAGYETPDEPTIWLQERDGEWLHWQQTQKRRHELAEILIKQQDR
FDAAQTQAAQWLERWKTQAAKRPVAEQEPRPDEATDDPAAALTRSAETIADLTQQLAAQQ
GRQTQLETNVTQQKKAVDEASTAWQTALAASPFADLAAYAAALLPTDERQRLQQLKEARQ
LAKQQAEAVLKAAGEKLLRLQTTPPPQDSAESPIPPLAELEAALAQLETSRRELSEQLGA
QRALLTRDEQARQSQQALFKDIAAQTAESDLWQRLDSLIGSARGDKFRKFAQGLTLDHLL
HLANSHLARLHGRYLLRRKTTGELELDIVDSWQGEVARDTRTLSGGESFLVSLALALALS
DLVSHKTSIDSLFLDEGFGTLDADTLEIALNALDTLNASGKMIGVISHVEGMKERIPAQI
RVEKGGGVGYSRLRI
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatccttagcctgcgcctgaagaacctcaattcgctgaagggcgaatggaccatc
gacttcaccaaagcccccttcaccgacaactgcctgttcgccatcaccggcccgactggc
gccggcaaatcgacgctgctcgacgccatctgcctcgccctttaccaccagacgccgcgc
ctgaagaccatctcggccaccgacaacgacatcatgacgcggcacaccgccgactgtctg
gctgaggtggaattcgaggtaaagggcgccgtctaccgtgccttctggagccagcgccgt
gcccgcgacaagatcgacggcgcgctgcaggcaccaaaagtggaattagccgccggcgac
ggcaccatcctcagtacccaaaccaacgacaagctgaagcgcatcgccgagatcaccggc
ctcgatttcccgcgtttcaccaagtccatgctgctcgcccaaggtggcttcgcagccttt
ctgaatgccagtgccaacgaacgggccgaactgctcgaagaactgaccggcaccgagatt
tacggcgagatttcgcgcaaggtttttgagcaggcacgcgacgccaaaagccagctcgag
cagttaaaagcccgtgccgacggcatggaactgctctccgaagagcaacgcgccgcgatg
caagccgaagtcacccgcctcgacacgcaactcaccgacacccagcgccgccaccagcaa
acccagagccagcgccagtggcgcctcgatctggcgcagggcgagcaggaagtcaaaacc
gccgaagccaggcagcaggaggccgatgcagcgctgacagcagcggcaccagacctgaag
aaactggccgacagcgaaccggccgaagccctgaagccgctgcaccagcaatggcaacag
gctagcgccgcctgccagcaaaccgaaaccgaactcaaggccctgcacgccgagcgcgaa
aaactgcaggcccaccaactcgcccagcaccaaaccgccagccagttaagcgcccaggtc
gccgcacaagcccagcaagccctgcaacaaagccagcgcgaagccaaacagctcgacgat
ttctgcgccacccacccgcaacgcgcccagcttggcgaacgcctcggcgtctggcgccag
cagtttgaacagcgggtcaagctgaaccgcgacctcgccgcccagcaacaggcccaacag
aagctcgaacaggaaatcgccgaaaccgcccgccagagcgccacacaagccagcgctgtc
gccagcgccgaaaaggccaaaaccaccgctgacgccgcactggaaaaaacccagaccgag
cagaacctgcgcctggccggccagaccctggccgaactgcgccagcactggcaaggcgag
caagccggcctcaaccgctggcagcaactcgaagccctcgctcagcgccgccgcgaactg
gccgtgctgcaaacaactcaggccacgcaagtgcagcagggcgaacaaaagatcgaggcc
caggaaaaggcgctggtcgccctgcgcgagcagcacaaggaactcgccgcccaggttgcc
gacaagcagaaactgcttgagcaggaacgccgcatccagagcctggaaacgcatcgccgc
caattgcagccgggcgaggcctgcccgctgtgcggcgcgcacgagcacccggcgattgcc
gactacgccgcacttgacgtttccgccactgaaacggcgctcaaggaaaaacaggccttg
ctcgaagcattggtccagaaaggccagcaagccaaaaccgagcaggcggcaacgcaggcc
acgcaaaaggaatggctggcccagcaggccaaaacaacgcaggaaattgcccgcgcccag
gccgaatggaccgaattcctcgccggcctgagcagcgaaacgccgctcgcaaccgatgcc
tggcaggaagcccaaaccctggcctccgcccgcaacgccgccgaacaggcactcgccaaa
ctcgccgaccggctgaaagcagcagaccaaggcgaacaagccctgaatgcggcccgcaag
acggccaccgaagccgcccagaccctgctcaacgccagcaaccaactcaagttgctgcag
cagacagcgcaaaccactcagcttcgtcagacagaactggccaaagcagcacaaacactg
actcaagaacgggctgaactcgacagcaaactagccgcaacgctgaccgatgccggctac
gagacgcctgacgaacccaccatctggctgcaagagcgcgatggcgaatggctgcactgg
cagcaaacgcagaaacgccgccacgaactggccgaaatcctgatcaaacagcaggatcgt
tttgatgccgcgcagacgcaggccgcgcagtggctggaacgctggaaaacgcaggccgca
aaacgcccggtcgctgagcaggagccaaggcctgacgaagccaccgacgacccggcagca
gccctcacccgcagcgccgaaaccattgccgatctgacccaacagctcgccgcccagcaa
ggccgccagacgcaactcgaaaccaacgtcacgcagcagaaaaaggccgtggacgaggca
tcgactgcctggcaaaccgcactcgccgccagccccttcgccgacctcgccgcctacgct
gcggcgctgctgccgaccgatgaacgccagcgcctgcagcaattgaaagaagcccggcaa
ctcgccaaacagcaagccgaagcggtgctcaaagccgccggcgaaaagctgctccgcctg
caaaccacgccaccgccgcaagactccgccgagtcccccattccaccgctggccgaactg
gaagcagccctagcccaactcgaaaccagccgccgcgaactcagcgaacaactcggtgct
cagcgcgccctgctcacccgcgatgaacaagcccggcaaagccagcaggcgctgttcaag
gatatcgccgcgcaaaccgccgaaagcgacctctggcagcgcctcgacagcctgattggt
tcagcgcggggcgacaagttccgcaagttcgcccaaggcctgaccctcgaccacctgctg
cacctcgccaacagccacctcgcccgcctgcacggccgctacctgctgcgccgcaaaacc
accggcgaactcgagctcgacatcgtcgacagctggcaaggcgaagtcgcccgcgacacc
cgcaccctctccggcggcgaaagcttcctggtcagcctggcgctcgcattggccctctcc
gacctcgtcagccacaagaccagcatcgattcgctcttcctcgacgaaggcttcggcacc
ctcgacgccgacaccctggaaatcgccctgaacgccctcgacaccctgaacgccagcggc
aagatgatcggtgtgatcagccacgtcgaaggcatgaaggagcggattccggcgcagatt
cgcgtggaaaaaggtggcggggttgggtattcgcggttgaggatttaa
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