Dechloromonas aromatica: Daro_3894
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Entry
Daro_3894 CDS
T00259
Name
(GenBank) deoxyribodipyrimidine photo-lyase type I
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
dar
Dechloromonas aromatica
Brite
KEGG Orthology (KO) [BR:
dar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dar03400
]
Daro_3894
Enzymes [BR:
dar01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Daro_3894
DNA repair and recombination proteins [BR:
dar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Daro_3894
Prokaryotic type
Daro_3894
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AAZ48622
UniProt:
Q478V9
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All DBs
Position
4184272..4185684
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AA seq
470 aa
AA seq
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MKKEKALVWFRRDLRDHDHAALSAALAEAQQVYCAFVFDSEILDPLPTRHDRRVHFIRES
LVELDAALRARGGGLIIRHGQAVDEIPALARRLGVSAVFTNRDYEPSAKRRDAQVARQLR
NDDIAFHGVKDQAIFDGDEVLTQAGKAFSVFTPYKNAWLKRLTTADYAAWPCDGRLAGQE
LAGIPTLEEIGFTPTDLAELGIQPGMSGAKGLWDDFSRDRIERYGSLRDFPAVKGVSYLS
VHLRFGTISIRQLVRQALAHQADTWLSELIWRDFYFMILDHFPHVAGHAFKPEYDAIQWA
SRPEAFAAWCEGCTGYPLVDAAMRQLNFSGWMHNRLRMVVASFLTKDLGIDWRLGEKYFA
EQLNDFDLSANNGGWQWASSSGCDAQPYFRIFNPVTQSEKFDAEGKFIRRYVPELAKVHD
KYIHAPWKMGRIEQEALGVVIGRDYPSPIVDHATARDETLARYAVVKKQA
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagaaaaagccttggtctggttccgccgcgacttgcgcgaccatgaccacgcc
gccctgagcgcggccctcgccgaggcgcagcaggtgtattgcgcctttgtcttcgatagc
gaaattctcgatccgctgccaacacgccatgatcgccgggtgcacttcatccgcgaatcg
ctggtcgaactggatgccgccttgcgagccaggggtggcgggctgatcattcggcacggc
caggccgtcgacgagattcctgctctcgccaggcggcttggcgtatctgccgtcttcacc
aaccgggattacgaaccctcggcgaaacgccgcgatgcccaggttgcccggcaacttcgg
aacgacgacattgcctttcacggtgtcaaggatcaggccattttcgatggcgacgaagta
ttaacccaggcgggaaaagccttttctgtttttaccccctacaagaatgcctggctaaaa
cgcctgaccaccgctgattacgctgcctggccctgtgatgggcgattggccggccaggaa
ctggcaggcattccaacgctggaagagattggctttactccgaccgacttggccgaactc
ggcatccagccgggcatgtcaggcgccaaagggctgtgggacgatttctcccgggaccgc
atcgagcgctatggcagcctgcgcgactttcctgccgtcaagggcgtctcctacctgtcc
gtccatctacgcttcgggaccatctcgatccgccaactggtcaggcaggcattggcacat
caggctgacacctggctcagcgagttgatctggcgcgacttctatttcatgatcctcgac
cattttccccacgtcgccggacacgccttcaagccggaatacgatgcaattcaatgggca
agccgtcctgaagcctttgcagcctggtgcgaaggttgcaccggctacccgctagtcgat
gcggccatgcgccaactcaatttcagcggctggatgcacaatcggctccgcatggtcgtc
gcctccttcctgaccaaggatctcggcatcgactggcggctcggcgaaaaatactttgcc
gagcaactcaacgacttcgatctgtctgccaacaacggcggctggcagtgggcctcatcg
agcggctgcgatgcccagccctattttcggattttcaacccggtcacgcagtcggaaaag
ttcgatgcggagggcaaattcatccgccgttatgtgccggaactggccaaggtacacgat
aaatacatccatgccccgtggaaaatggggcgcatcgaacaggaagcactcggggtggtg
atcggacgcgactacccgtcgccgatcgtcgatcacgcaacggccagggatgaaaccctg
gcccgctacgcagtcgtcaagaagcaggcctaa
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