Pseudodesulfovibrio aespoeensis: Daes_1415
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Entry
Daes_1415 CDS
T01382
Name
(GenBank) RNA modification enzyme, MiaB family
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
das
Pseudodesulfovibrio aespoeensis
Brite
KEGG Orthology (KO) [BR:
das00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
das03016
]
Daes_1415
Enzymes [BR:
das01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
Daes_1415
Transfer RNA biogenesis [BR:
das03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
Daes_1415
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
Motif
Other DBs
NCBI-ProteinID:
ADU62429
UniProt:
E6VVY4
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All DBs
Position
1589078..1590436
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AA seq
452 aa
AA seq
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MKFHITTFGCQMNVHDSQWLARALESRGWQEAGEDEALVYIFNTCSVRDKPEQKVYSELG
RIAAHLGRDDRVFAVVGGCVAQQIGRGFFERFPFVRLVFGSDGIVGAPNALERLVAGDDE
RVALLDFMPVYEERETPGEQTANRTRQAFVTIMQGCDNFCAYCIVPYTRGRQKSRHPDAV
VDECRALVASGVREITLLGQNVNSFGLDKGGAGVSFAQLLRRVAGLDGLDRLRFTTSHPK
DIAPEVIAAFGEFDMLCPSLHLPLQSGSDAMLKAMRRRYTLDHYMRTVEALRRARPGIAL
TTDLIVGFPGETEADFQATLDVMEAVGYDSSFSFKYSDRPGVAAVNMEPKVDPQVAADRL
MRLQTLQNSITRKCLKMLEGVETDVFVEGLSRIQDPGATSSTATSWKGRDPAGRIVNVPT
DVREGLVGLLMPVRITQAKKHSLMGERIGTPW
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgaaattccacatcaccaccttcggctgccagatgaacgtccacgattcgcagtggctg
gcccgcgccctggagagccggggctggcaggaggcgggcgaggacgaggctctggtctat
atcttcaacacctgtagcgtccgagacaagcccgagcagaaggtgtacagtgagcttggc
cgcatcgcggcccatcttgggcgcgacgaccgggtttttgccgtggtgggcgggtgcgtg
gcccagcagataggccgggggttcttcgagcggttcccttttgtccggcttgtcttcggc
tctgacggcatcgtgggtgcgcccaatgccctggagcgcttggtggccggggacgacgag
cgggtggccctgctcgatttcatgcccgtgtacgaggagcgtgagacccctggggagcag
acggcaaaccgtacccggcaggcgttcgtcaccatcatgcaggggtgcgacaatttttgc
gcttactgcatagtgccctatacccgcgggcggcagaagtcgcgccatccggacgcggtg
gtggatgaatgccgcgccctggttgcctccggggtgcgcgagatcaccctgctcgggcag
aacgtcaacagcttcggcctggacaagggcggggcgggcgtcagcttcgcccagttgctc
aggcgcgtggccgggcttgacggtctggaccggctgcgcttcaccacctcgcaccccaag
gacatcgcgcctgaagtcattgcggccttcggcgagttcgacatgctgtgtccgtcgctg
cacctgcccctgcaatccggctccgatgcgatgctcaaggccatgcgccgccggtacacg
ctggaccactacatgcgcactgtcgaggccctgaggcgggcgcggcccggcatcgccctg
accacggatctcatcgtgggctttcccggcgagaccgaggcggattttcaggccaccctc
gacgtcatggaggccgtggggtatgattcgagcttttccttcaagtattccgacaggcct
ggcgtggccgctgtgaacatggagccgaaagttgatccccaagtggctgcggaccgcttg
atgcgcttgcagactctgcaaaatagtattactagaaaatgtctaaaaatgcttgagggt
gtcgaaacggacgtgtttgtcgaggggctgagccgtattcaggacccaggggccacctcc
tccaccgccacttcctggaagggccgcgatccggcagggcgcatcgtcaatgtccccacg
gacgtgcgcgaggggctggtcggcctgctcatgcctgtccggatcacacaggccaagaag
cattcgctcatgggcgaaaggatcggaacgccgtggtaa
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