Pseudodesulfovibrio aespoeensis: Daes_1768
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Entry
Daes_1768 CDS
T01382
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
das
Pseudodesulfovibrio aespoeensis
Pathway
das03420
Nucleotide excision repair
das03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
das00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Daes_1768
03430 Mismatch repair
Daes_1768
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
das03400
]
Daes_1768
Enzymes [BR:
das01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Daes_1768
DNA repair and recombination proteins [BR:
das03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Daes_1768
MMR (mismatch excision repair)
Other MMR factors
Daes_1768
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
DEAD
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ADU62780
UniProt:
E6VYL7
LinkDB
All DBs
Position
1956989..1959136
Genome browser
AA seq
715 aa
AA seq
DB search
MDIETELNNAQREAVLTTEGPVLVIAGAGSGKTRTIVYRLAHLVRQGVDPAQILLLTFTR
KAAQEMLARAGAILGHPLTGTSGGTFHSFAYATLRRNTSDIGFGNGFTLMDRADCEAVCR
DVKETLKLGKGDRSYPKKATLLDMITKSRNKELTIATVMEREAYHLSPYLDDLSAIADGY
AVFKKQHALVDYDDLLFLLDTLLADNEPLRNQLRTRYRYIMVDEYQDTNLVQARIVGHLA
GERGNVMAVGDDAQSIYAFRGANVANIMDFPKIFEGTKIIRLEKNYRSVQPILDLTNEIL
SGAAIKFDKHLYSDLKSDVLPQVVYPLSDQTQARLTVEHILDLGRKYALHDVAVLFRAGY
QSFPLEVALTRVGLDYQKFGGIRFHEAAHIKDVLALLRLVVNPHDLMAWQRAVEHVKGIG
PKTVARIYRAMHTDDAKYMATITKKHDELRELLNELDGLRAMAGRPSAILERILAFYQPI
LIDKYPDDYPKRQAGLEQLGQIAHNYTDMDQLLGDLSLDGDPDDEKRKENAVVLSTIHSA
KGLEWSAVIIIDLVEERFPSRKAMQRPEDLEEERRLMYVACTRAKECLTLFVPSSVYNRQ
SGISDPTLPSPFVLELPSTVFTPLKESYGGSLEKRWPVDSRPSFGTAAKSAVREQDAQPV
QARPAATVNPEKLGFCTHKIFGRGKIIACPAPNKYKVNFPGFGIKTIIGDYLEML
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atggatatagagaccgaactcaacaacgcccagcgcgaggcagtgctgaccaccgaaggc
ccggtgctggtcatcgccggggcgggatcgggcaagacccggaccatcgtctaccggctg
gcccatctggtgcgccagggcgtggacccagcccagatcctgctgctgaccttcacccgc
aaggcggcccaggagatgctggcacgcgccggggccatcctcggccatcccctgacaggc
accagtggcggcaccttccactcctttgcctacgccaccctgcgccgcaacacctcggac
atcgggttcggcaacggcttcaccctcatggaccgcgccgactgcgaggccgtgtgccgg
gatgtcaaggaaacgctcaagctcggcaagggcgaccgctcctatcccaagaaggccacc
ctgctcgacatgatcaccaagtcgcgcaacaaggagctgaccatcgcgaccgtcatggag
cgcgaggcgtaccacctctccccctatctcgacgacctgagcgccatcgccgacggctac
gcggtcttcaagaagcagcacgccctggtggactacgacgacctgctcttcctgctcgac
acgctcctggccgacaacgaacccctcaggaaccagctccggacccgctaccgctacatc
atggtggacgaataccaggacaccaaccttgtccaggcgcgcatcgtcgggcatctggcg
ggcgagcgcggcaatgtcatggccgtgggcgacgacgcccagtccatctacgccttccgg
ggcgcaaacgtcgccaacatcatggatttcccgaagattttcgaagggacaaagatcatc
aggctggagaagaactaccgctcggtgcagcccatcctcgatttgaccaatgaaatcctg
agcggcgcagccatcaagttcgacaagcacctctactcggacctgaaaagcgacgtcctg
ccccaggtggtctatcccctgagcgaccagacccaggcccggctgacggtggagcacatc
ctcgaccttggccgcaagtatgcactgcacgacgtggccgtgctcttccgggcgggctat
cagtcgtttccccttgaggtggcgctcacccgcgtgggcctcgactaccagaagttcggg
ggcatccgcttccacgaggcggcccacatcaaggacgtgctggccttgctgcggctggtg
gtcaatccgcacgacctgatggcctggcagcgggccgtggagcacgtcaagggcatcggc
cccaagaccgtggccaggatatacagggccatgcacaccgacgacgccaagtacatggcc
accatcaccaagaaacacgacgaactgcgcgaactcctgaacgagctcgacgggctgcgg
gccatggcaggcaggccgtcggccattctggagcgcatccttgccttctaccagcccatc
ctcatcgacaaatacccggacgactaccccaagcggcaggccgggctggagcagctcggc
cagatcgcccataactacacggacatggaccagctcctgggcgacctctccctggacggc
gacccggatgacgagaaacgcaaggaaaacgccgtggtcctgtccacgatccactcggcc
aaggggcttgaatggagcgcggtgatcatcatcgatctggtggaggaacggttcccctcg
cgcaaggccatgcagcggcccgaggatctcgaagaggaacgccgactgatgtacgtggcc
tgcaccagggccaaggaatgcctcacgctcttcgtgcccagctcggtctacaaccgccaa
agcggcatctcggacccgactctgcccagcccttttgtgctggagctgccctccacggtc
ttcaccccgctcaaggaatcctacggcggctccctggagaagcgctggcccgtggactcc
aggccctcctttggcacggctgccaagtcagcggtcagggagcaggacgcacagccggtt
caggcccggcccgcagccacggtcaacccggaaaaactcggcttctgcacccacaagatc
ttcgggcggggcaagatcatcgcctgccccgcgcccaacaagtacaaggtgaacttccca
ggttttggcatcaagaccatcatcggggattatcttgaaatgctctga
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