Pseudodesulfovibrio aespoeensis: Daes_2355
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Entry
Daes_2355 CDS
T01382
Name
(GenBank) sigma-54 factor interaction domain-containing protein
KO
K02584
Nif-specific regulatory protein
Organism
das
Pseudodesulfovibrio aespoeensis
Pathway
das02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
das00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Daes_2355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
das03000
]
Daes_2355
Transcription factors [BR:
das03000
]
Prokaryotic type
Helix-turn-helix
Other families
Daes_2355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
GAF_2
AAA
AAA_3
AAA_5
Mg_chelatase
HTH_8
Parvo_NS1
MCM
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ADU63360
UniProt:
E6VTS3
LinkDB
All DBs
Position
2566030..2567610
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AA seq
526 aa
AA seq
DB search
MAHKKQDDSDLSYLVTLKTIQDTLKRDAPLEESLNQLLRILAQDMEYVRAFMVIMDPKTE
NLKLSLTYSPARSDDVTYSPGRGVIGRVFNTGESITIPRMSDDKEFLNKAFGRSEEELRK
LGFICVPVINRGTDHEEVIGALSVDVPLIPAEDLDAHRQFLEVVAGIIAGHVAQLQEEMA
THNHLLTQGMMAGGPDSTPPKDFVAASKAMRLVLRQSRQVAPSRATALLRGQSGTGKELL
AEAIHSASPRADKPLIKLNCAALPSELIESELFGHQKGAFTGAFQTKRGLFEVADQGTLF
LDEIGELSMDAQAKVLRAIQEKEIQRVGSEQTITVDVRLICATHQPLEELLQKGRFREDL
YYRINVFPIFIPPLHERREDILPLAEHFLSDFSSEYGKEVKRISTPAIELLVMYHWPGNV
RELKNCIERAVLLCEESVIRTYHLPPTLQSAESSATGINLSFGEAVAKFEQELLVDSLKK
TGGNMLQSARDLRVSYRIVNYKVKKYNLDVKRFSQTKKKPRKKLEN
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggcacacaagaaacaggacgactccgacctcagctatctggtcaccctcaagaccatt
caggacaccctcaagcgggacgccccgcttgaggaatcgctgaaccagctgctcagaata
ctggcccaggacatggagtatgtccgggcgttcatggtcatcatggaccccaagaccgaa
aacctgaagctctcgctcacctacagcccggcccgctccgacgacgtgacctattcgccg
ggccggggcgtcatcggtcgcgtgttcaacacgggcgagtccatcaccatcccgcgcatg
tccgacgacaaggagttcctgaacaaggcgttcggacgcagcgaagaggaacttcgcaag
ctcggcttcatctgcgtgccggtcatcaaccggggcacggaccacgaggaagtcatcggc
gcgctctcggtggacgtacccctgatcccggccgaggacctcgacgcgcaccgccagttt
ctcgaagtggtggcgggcatcatcgcgggccatgtggcccagttgcaggaggagatggca
acccataaccacctgctcacccagggcatgatggccggcggcccggactcgaccccgccc
aaggacttcgtggccgccagcaaggccatgcgcctcgtgctcaggcagtcgcgccaggtg
gcccccagccgggccacggcgctgctgcgcggccagtccggcaccggcaaggagctgctg
gccgaggccatccattcggccagtcccagggccgacaagccgctgatcaagctcaactgc
gcggccctgccctcggagctcatcgagtccgagctgttcggccaccagaagggcgcgttc
accggcgcattccagaccaagcgcggcctgttcgaggtggcggaccagggcaccctgttc
ctcgacgagatcggcgagctgtccatggacgcccaggccaaggtgctgcgcgccatccag
gagaaggaaatccagcgcgtgggcagcgagcagaccatcaccgtggacgtccggctcatc
tgcgccacccaccagcctctggaggagctgctccagaagggcaggttccgcgaggacctc
tactaccggatcaacgtcttccccatcttcatcccgccgctccatgagcggcgcgaggac
atcctgcccctggccgaacatttcctgagcgatttttccagcgagtacggcaaggaggtc
aaacgcatctccaccccggccattgagctgctggtcatgtaccactggcccggcaacgtg
cgcgagctcaagaactgcatcgaacgcgccgtgctgctgtgcgaggagtcggtcatccgc
acctaccacctgccgcccacgctccagtccgccgaaagctcggccacgggcatcaacctc
tcctttggcgaggccgtggccaagttcgaacaggagttgctggtggattcgctcaagaag
accggcggcaacatgctccagtccgcccgcgacctgcgcgtctcctaccgcatcgtcaac
tacaaggtgaagaagtacaacctcgacgtgaaaaggttctcgcagaccaagaagaagccc
aggaaaaagctggagaactga
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