Pseudodesulfovibrio aespoeensis: Daes_3011
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Entry
Daes_3011 CDS
T01382
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
das
Pseudodesulfovibrio aespoeensis
Pathway
das03030
DNA replication
das03430
Mismatch repair
das03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
das00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Daes_3011
03430 Mismatch repair
Daes_3011
03440 Homologous recombination
Daes_3011
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
das03032
]
Daes_3011
03400 DNA repair and recombination proteins [BR:
das03400
]
Daes_3011
Enzymes [BR:
das01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Daes_3011
DNA replication proteins [BR:
das03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Daes_3011
DNA repair and recombination proteins [BR:
das03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Daes_3011
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ADU64004
UniProt:
E6VZD2
LinkDB
All DBs
Position
complement(3251558..3252097)
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AA seq
179 aa
AA seq
DB search
MTPTVETTRFVAIDFETADAKRDSACAVGLVVVDRGEIVARDYRLIRPPRRRFNPFCVQV
HGIHWEDVADQPAFGELWPDLSPLFEGADFLVAHNASFDKSVLAACCRESRCLPPVQPFL
CTVQLARTTWQLPSNKLPNVCCHLGITLTHHHAASDAEACARIAVSGLRENPAFLSRVL
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgacacccaccgttgagaccacccgattcgtggccatagatttcgagactgcggacgcc
aagcgcgattcggcctgcgccgtgggccttgtggtggtggaccggggcgagatcgtggcc
cgcgactatcgcctcatccggccccccaggcggcggttcaaccccttttgcgtccaggtc
cacggcatccactgggaggacgtggccgatcagcccgcctttggcgagttgtggccggat
ttgtccccactctttgagggcgcggattttctcgtggcccacaacgcctcgttcgacaag
tccgtgctcgccgcctgctgccgcgagtcgcgctgcctgccgcctgtgcagccgtttctg
tgcactgtccagttggcgcgcaccacctggcagctgccgtccaacaagctgcccaatgtc
tgctgccatctcggcatcacactcacccaccaccacgccgcgtctgatgccgaggcgtgc
gcgcgcatcgcggtcagcggactgcgcgagaaccccgccttcctgagccgggtgctgtga
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