Desulforapulum autotrophicum: HRM2_00120
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Entry
HRM2_00120 CDS
T00861
Name
(GenBank) SWI/SNF helicase family protein
Organism
dat
Desulforapulum autotrophicum
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HDA2-3
Motif
Other DBs
NCBI-ProteinID:
ACN13135
UniProt:
C0QD97
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Position
13411..17589
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AA seq
1392 aa
AA seq
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MEKKNNPVARAYRQLDPVLKTMVRILAVQVSELTQKQMGACLNALGLRDQENMPFVQKNL
QPLVKALEQQNLLIKKPKGITCPESVWATAVEDAVTTGQFQQIALTLLDAMPIQRSPNGY
FFRRLEDFYRAFQMAVYGGDTRFDLDVVHRSGNFYFPMAFQENPPVQVLFNRPFQPLIFD
CMAPKTRLKIIEYILESAGRNLEPVGDALEYGVALLSKTPGLETSHGILTWLLFRGEIAR
LQAISGRLKASPSVSASMGWGKVICGDNDGALTCFNAALAAIKKNTRKRKVFLTGYEGLF
FLFALLKSTADDDHRAALACIDIADKEKNPCLPVMVAMKPMFQEKLGLVAPVYDSLDHCI
EQNHAVISFLSILVMTWTDKKRAKSHISILESVRERAFRSGLRWIEAEASALLAELGEEV
EINGKRSEKIHQACGTKTLATLVKPVSLWEKNLNSLIHIGEALTQKPKAEADYRELRLVW
LMQHSEKYNTCHITPRLQKRSKDNTWTKGRPVALKKLYGAYPTMEGLTDQDRQVASAIVE
ESFRSGYRYGYRKIDYRFDGDKALPALVGHPLIFIGAALESPVELVMGAPEVSFRIQDGM
INVQMKPRPIDEIYNVLVVRETPSRFKVVRFSAEHLKIARILGEKGLDLPEEAEEMATQA
IASISSLVTVNSDLSAGSGGQVREIAADPTPHVHIMPCQKGIKIEFLIRPFTHTGSYFRP
GRGGINVFADVKGEKVQAIRDMRLEKERSRAVISQCPTLDRLEEVGGQWLVEDPEEALEL
LFELKNHREEMVIEWPQGEKMQVSSHQVAFDDFKLSVKKDREWFKATGTFTIDENLTLDL
SRLMELLDNPSGRFIPMDDGTFLAITLALKERLEELKAYSIPHGKGFRFAPLAAPAIEEL
TGQVGSLKSDKAWTTHCRKLKEVINPELPGTLQACLRDYQVDGFNWLAQLVHWQVGACLA
DDMGLGKTVQALAAILLHAGDGPTLVVAPLSVMANWQDECHCFTPTLNPIVFGPGDRQKV
LDNLGPFDLLISSYGLLQVAAEQLAGVTWQTIVLDEAQAIKNMRTKRSKAAMKLSAGFRM
ITTGTPVENHLDELWTLFNFLNPGLLGTFNHFKNAFAIPIERDQDKKASGRLKKLIRPFI
LRRMKTHVLKELPEKTEITLQVEMSQDERVLYEAHRLKAVENIEAAEDTPGQKHLRILAE
LTKLRQLCCNPSLVLPGTKITSSKLKVFGDMVDELLENNHKALVFSQFVGHLAILKKFLD
AKKISYQYLDGSTRAGQRRERINAFQSGVGELFLISLKAGGFGLNLTAADYVIHMDPWWN
PAVEDQASDRAYRIGQTRPVTVYRLVVKGSIEERILDLHREKRDLAESLLTGSDMAGKIS
AEDLLGFLRQEG
NT seq
4179 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaaagaacaatcccgttgccagggcttaccggcagcttgaccctgtcttgaaa
acaatggtccggattctggcagttcaggtgtctgaattgacccagaagcaaatgggggct
tgtttgaatgccctgggactcagagatcaagagaatatgccctttgtgcagaaaaacctt
caaccccttgtaaaggcgcttgagcagcagaatcttttgattaaaaaacccaaggggatc
acctgccctgaatccgtatgggcaacagcggttgaggatgccgtaaccacaggtcagttc
cagcaaatagccttgactctcctggacgcgatgccgattcaaagatcacccaacgggtat
tttttccggcgacttgaagatttttacagggcatttcaaatggcggtttatgggggggat
acccgctttgacctggatgtggttcaccgttccggcaatttttattttcccatggcgttt
caggaaaacccgcctgtccaggttctgtttaaccgtccgtttcagcccctgatttttgac
tgtatggctccgaaaacgagattaaaaatcattgaatatatcctggagtcggcaggacga
aatctggaacccgtgggggatgccctggaatatggtgtggcgcttctgtcaaaaacgccc
gggctggaaacaagccatgggatattgacctggctgttgtttaggggggagatcgcccgc
cttcaggcgatttctggccggttgaaagcgtccccgtctgtttcagcttcaatgggatgg
ggcaaggtgatctgtggcgacaatgacggtgccttgacctgttttaacgctgccctggct
gccataaaaaaaaatacccgtaaaagaaaggtgtttctgactgggtatgaagggctgttt
tttctgtttgccctgttgaaaagtacagcagacgacgaccaccgggctgccctggcctgt
attgatattgccgacaaagagaaaaatccctgcctgccggtgatggtggccatgaaaccc
atgttccaggagaagctcgggcttgttgccccggtgtatgattcccttgaccactgcatt
gaacagaaccatgcggttatctcttttttaagtatccttgtcatgacctggacagataaa
aaaagagccaaatcccatatatcaatcctggagagcgtcagagaacgagcctttagatca
ggccttcgatggatagaagctgaggcaagtgcactgcttgcggagttgggcgaagaggtt
gaaataaatggtaagcggtcagaaaaaatccatcaagcgtgtggtactaaaacccttgct
acactggttaaacccgtttccctctgggaaaaaaatcttaattcactgattcatataggg
gaagcccttacccagaaaccaaaagctgaagcagactaccgtgaattgcgccttgtctgg
ctgatgcagcacagtgaaaaatacaatacctgccatatcaccccccgccttcagaaacgc
tcaaaggacaacacctggaccaaggggagacccgtggctttgaaaaaactctacggggct
tacccaaccatggaggggttgacggaccaggacagacaggtggccagtgccattgttgaa
gaatccttcagaagcggttaccgttatggttaccgtaagatcgactatcgctttgatggg
gacaaggcgttgccagcccttgtgggtcatccccttatttttattggcgctgcccttgaa
agccccgtggagcttgttatgggagcgcctgaagtcagctttcgtatccaggatgggatg
atcaatgtccagatgaagccccggccgatcgatgaaatttacaatgttctcgtggtcagg
gaaacgccttcgcgctttaaagtggttaggttctctgccgagcatttaaaaattgcgagg
attctgggtgaaaaagggctggacttgcctgaagaagctgaagagatggcaacccaggca
atagcctctatttcatccctggttaccgtcaactcggacctttcagccgggtcaggtgga
caggtcagggaaatagctgccgaccccacgccccatgttcatataatgccctgccagaaa
gggatcaagattgaatttctgatcagaccttttacccatacgggttcctactttagacct
ggacgtgggggaatcaatgtttttgccgatgttaaaggagaaaaggtacaggccatacgc
gatatgcgtctggaaaaagaacgatcccgggccgtgatttcccaatgccccaccctggat
cgccttgaagaggtgggaggtcagtggctggtggaagatcctgaagaggcccttgagctt
ctttttgagctgaaaaatcacagggaagagatggtgattgaatggccccagggagaaaaa
atgcaggtaagctcccaccaggtagcatttgatgacttcaagttgagtgttaaaaaagac
cgggaatggttcaaggccacgggtacattcaccattgacgaaaacctgacactggatttg
tccaggcttatggaactgcttgataacccttccggtcgatttatacccatggatgacggc
acctttctggccataacccttgccctgaaagagcggcttgaggagttgaaggcctattcc
atcccccatggaaaggggtttcggtttgcgcccctggcagctccggccattgaagaactc
accggtcaggtgggatccttgaagagtgacaaggcctggacgacccattgcagaaaactc
aaggaggttattaaccctgaacttcccggcaccctccaggcatgcctcagggattatcag
gtggacggctttaattggctggcccagctggttcactggcaggtgggtgcctgcctggcc
gatgacatgggactgggtaaaacggttcaagcccttgccgccattcttctccatgccggt
gacggcccaacccttgtggtggcccccctgtcggtcatggccaattggcaggatgagtgt
cattgttttacccccactctcaatcccattgtctttggaccgggagaccgccaaaaggtc
ttggacaacctggggccgtttgatcttctgatctcaagttatggccttctccaggttgca
gcagaacaattggccggtgtgacgtggcagaccattgtactggatgaggcccaggccatc
aaaaacatgcggacaaaacggtctaaagcggccatgaagctcagcgccgggttcaggatg
atcaccacgggaactcctgtggaaaatcacctggacgagttgtggaccctgtttaatttt
ctcaatcctggtcttttgggtacctttaatcattttaagaatgcctttgccattcccatt
gagcgggatcaggacaagaaagcctctggcagattgaaaaaactgatccgcccgtttatt
ctgcgtcgcatgaaaacccatgtactcaaggaacttcccgaaaagacagaaatcaccctc
caggtggagatgagccaggatgaacgagtgttgtacgaggcccatcgccttaaggctgtt
gagaatattgaagcggctgaagacacccccggacaaaagcatttgcgcattttagctgaa
ttgacgaaactgaggcagctctgctgcaatccatctctggtccttccagggacaaagatt
acaagttccaagctcaaggtgtttggcgatatggtggatgagctgcttgaaaacaatcat
aaagcccttgttttcagtcagtttgtggggcatcttgccattctgaaaaaattcctggat
gcaaaaaaaatcagctaccagtatctggacggatccacacgggccgggcaacgccgggaa
cgaatcaacgcatttcaaagcggggtgggtgagctttttctgatcagcctcaaggcgggt
ggttttggtctgaatctcacggcagccgattatgtcattcacatggatccctggtggaat
ccggccgtggaggatcaggcttcagaccgcgcttaccgaatcggccagacccgaccggta
accgtttatcgcctggttgtcaaaggttccattgaagaacggattctggatctccacagg
gaaaaacgagaccttgcagaaagcctgctcaccggtagtgacatggcaggtaaaatttcg
gccgaagatctgcttgggtttttgcgacaggaagggtaa
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