Desulforapulum autotrophicum: HRM2_05340
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Entry
HRM2_05340 CDS
T00861
Symbol
priA
Name
(GenBank) PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
dat
Desulforapulum autotrophicum
Pathway
dat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HRM2_05340 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dat03400
]
HRM2_05340 (priA)
Enzymes [BR:
dat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HRM2_05340 (priA)
DNA repair and recombination proteins [BR:
dat03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HRM2_05340 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
Penicillinase_R
SLFN-g3_helicase
Zeta_toxin
AAA_19
TrwB_AAD_bind
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ACN13648
UniProt:
C0QHU0
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All DBs
Position
607284..609731
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AA seq
815 aa
AA seq
DB search
MENQNFIEIAVALPVHGTFTYTLPLDLAAEAIPGMRVLVPFGNRRVTGYVLGPGHENTEF
KAKPIQGLLDEAPLFPPAMIELFRWVSDYYIHPLGEVIKAALPKGLNRYDVSFLSLVEKP
GNLPDLPDLPDLSPREQAVVDLLKKKGSVSVKSLVGRGKNPSVSALVRRLIQKGVIQQAA
RLKKDQIQMKTEKFILPTGQGEPMERMSAKRRQILEIVREKGEISLTLLKQEVPTAPKLV
KILAGAGYLEVIERQVFRDPLGDPVDPDVPPELMDEQAGVVNQVISEMDKGFSRYLLSGV
TGSGKTEVYLRLVTEAMDRGQGALVLVPEISLISQTERRFRARFGKKIAVLHSGLTMGER
LDQWNRIMTGDAVIVIGVRSSVFAPINNLGIIIVDEEHDTSYKQETGLRYNARDIAVVRA
KIENIPVVLGSATPSVQSYYNVCEGRFKELKLTKRVNCHPLPEIELVDLKRYKDFRGIER
IITPELSRGIGHCLERGEQALIFLNRRGFATYPVCQACNEPVKCKFCDLTMTLHMDTNEF
RCHLCGFSMSMNQPCPNCNARRIKPLGFGTERIENMLQVLFPDARVARLDQDTGSKKGAM
VSILKKVKHRTVDIIIGTQMLAKGHDFPFITLVGVICADLSLNFPDFRAGERTFQLLAQV
AGRAGRGDRKGRVVMQTYNPEHFSIEASKNQDFVEFYHKEIPFRKGLGYPPVSRIIQLKI
SGLDKDKVKVHALFVGEECKRLVDQDRENGHLVQILGPIEAGIPKIAMRYRWQILLKSPR
ATLLNRLVRAMLAEKKVFANREVTVGIDVDPYSMS
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatcagaattttatcgagattgccgttgcccttcctgtccatggcacttttacc
tatacccttcctttggatcttgctgccgaggcaattccgggtatgcgggtgctggttccc
tttgggaatagaagggttacgggctatgtccttggcccgggccatgaaaacactgaattt
aaggcaaaacccatccagggacttctggatgaggcccccctttttcctccggccatgatc
gaattgttcagatgggtgtctgactactacatccatcccctgggtgaggtgatcaaggct
gcacttccaaaggggctgaaccggtatgacgtttcgtttctctcccttgttgaaaaacct
ggaaacctgcctgacctgcctgacctgcctgatctctcgcccagagaacaggccgttgtg
gatctgttgaaaaaaaaaggatctgtctcggtgaagagtcttgtgggacggggtaagaac
ccatctgtttcggcccttgtcaggcgattgatccagaagggtgtgatccagcaggcggca
cggttgaaaaaagatcagatccagatgaagactgagaaatttatcctgcccaccggacag
ggggagcccatggagcggatgtctgccaaacgcaggcagatcctggagattgtccgtgaa
aagggcgaaatctccctgacccttctcaagcaggaggtgcccacggccccgaagcttgtg
aagattcttgccggggcaggctaccttgaagtcatcgagcgtcaggtgttcagggacccc
ctgggggacccggtggatcccgacgtgccccctgagttgatggacgagcaggcaggggtt
gtgaaccaggtgatctcggagatggacaagggattttcccggtatctgctttcgggtgtt
acgggcagtggcaagaccgaggtctacctgcgccttgtgaccgaggccatggacaggggg
cagggtgccctggtgcttgtgccggagatttccctgatttcccagaccgaacggcgtttt
cgggcaagatttggcaaaaagatcgctgtgctccacagtggcctgaccatgggggaacgc
cttgaccagtggaaccggatcatgaccggggatgccgtcattgtcatcggggttcggtcg
tcggtgtttgctcccatcaacaatctgggtatcatcattgtggatgaggagcacgatacc
tcctacaagcaggagaccggccttcgctacaacgcccgggacattgccgtggttcgggcc
aaaattgagaacatccctgtggtcctggggtcggcaaccccgtctgtgcaatcctattac
aatgtgtgcgagggaagattcaaggaactcaagctgacaaaacgggtcaactgccatccc
ctgcctgagatagagcttgtggacctcaagcgctacaaggacttcaggggtatagagcgg
atcattactcccgaactttcaagggggatcggccattgccttgagcgtggagagcaggcc
ctgatttttctgaaccgtcgggggtttgccacctatcccgtgtgccaggcgtgtaatgag
ccggtgaagtgcaaattttgcgatctgaccatgacactgcacatggacacaaacgaattc
cgctgccatttgtgcggattttccatgtccatgaatcagccctgtcccaattgtaatgcc
cgacggatcaaacccctggggtttggcaccgagcgtattgaaaacatgcttcaggttctt
tttccggacgcaagggtggcaaggcttgaccaggatactggctctaaaaagggggccatg
gtttccattctgaaaaaggtgaagcatcgaaccgtggatataatcatcggcacccagatg
cttgccaagggccatgattttccgtttatcaccctggtgggggtgatctgtgcagatctt
tcgcttaattttcccgatttcagggcaggagagaggacctttcagctcctggcccaggtg
gcgggaagggccgggcggggggatcgaaaggggcgggtggtcatgcagacctacaatcct
gaacatttcagcattgaggcgtccaaaaatcaggactttgtcgaattctaccataaggaa
atcccttttagaaaggggcttggctatccaccggtctccaggattattcagctgaaaatt
tcgggactcgataaggacaaggttaaggtacatgccctctttgtgggcgaagagtgcaag
cgcctggttgaccaggaccgtgaaaatggtcatctggttcagatcctcggccctattgag
gcgggtattccaaagatcgccatgcgctaccggtggcagatcctgttgaaaagtccccgg
gcaaccctgttgaacaggcttgtccgggccatgctggccgagaaaaaggtttttgccaac
agggaggttactgttggaattgatgtggacccctattccatgagttag
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