KEGG   Desulforapulum autotrophicum: HRM2_05520
Entry
HRM2_05520        CDS       T00861                                 
Name
(GenBank) putative CRISPR-associated helicase Cas3 (ATP-dependent DNA helicase)
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
dat  Desulforapulum autotrophicum
Brite
KEGG Orthology (KO) [BR:dat00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:dat02048]
    HRM2_05520
Enzymes [BR:dat01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     HRM2_05520
Prokaryotic defense system [BR:dat02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    HRM2_05520
SSDB
Motif
Pfam: Cas3-like_C_2 DEAD ResIII PhoH Helicase_C AAA_22 nSTAND3 HD AAA_25 AAA_19 ORC_WH_C Cas3_HD
Other DBs
NCBI-ProteinID: ACN13666
UniProt: C0QHV8
LinkDB
Position
626730..628991
AA seq 753 aa
MSSFNIDEHYSSHPDYPLQRHLSNIAASFDDDTHRKAAMFHDLGKLSDEFQNYLNDPDHK
KGTTHALESALIYLWFVNCQLTPQTFAVFFSILKHHGDLEDVHDFLYYKLAFSEDLLEKD
PGLEEKIRVICDRASILSDIDMRNLCDGFDLDDIVRENKLNLIQNYFLVKDVFSRLIFSD
KYEAIFKESFSEKNETCWEEYLSRLIKLIESKKNKMASIRNQARNEILDNYRENRDKKIY
IIEAPTGIGKTFSALHLALEICRDKNKKRIINALPMTSIIDQTYEEYGLVINDDDLLKFH
HLTRSKSYGSSEGDEKKETNSLGRQQNDFIAMSWSSDKVIVTTFNQLFNAFYSNKNRDLI
KFWTLRDSVVILDEIQAVPRILIQDLIKTILYLSEHFNIDFVIMSATIPAIKNFIPSEKI
AELLDNRYFSMDFNNRYSLKIDTDINTPESLWSAITINYENVNSLLCVLNTKKLSLETYN
ELEHSIDSSELFFLNTNFIPKHRSEIIRNIRNRLKNNQKTLLVSTQVVEAGVDLDFDFGI
REFAPLYSMIQTAGRVNREGTKTGAVLQVTNKIGFSPYHGNDLLKKEVSELFQSQMEENE
ILPILKKYFQMAIERTPPDPILLSPMKELKFQTVHNLFIDNYMKEIPNLSSVFIEVEVGL
YSQFYYKIESLYEALKHPGISLEEKMNYRSRLKGVFKEISQYVINVSRDEVVDLKDFYKN
VEIQVCPHEFIGDKKRYSINKGWLGEKSLDIHF
NT seq 2262 nt   +upstreamnt  +downstreamnt
gtgagttcgtttaatattgatgaacactatagctcccacccggactaccccctgcagcgg
cacttgtcgaatattgcagcctcttttgatgatgatacccatcggaaggctgcaatgttt
catgatttgggaaagctttcggatgaatttcagaactatctgaatgatcctgatcataaa
aaaggtacgacccatgctctggagagtgcattaatatatctttggtttgtaaactgtcag
ctgacgccgcaaacctttgctgtctttttttccattctgaagcaccatggagaccttgaa
gatgtccatgactttctctactataaactggcattcagtgaggacctgctggaaaaggat
cccggccttgaagagaaaataagggtgatttgtgatagggcatcaattttgtcggatatt
gatatgagaaatctctgtgatggttttgatctggatgatattgtcagggagaataagtta
aacttgatccaaaactattttcttgtgaaagatgttttttccaggttaatcttttcagat
aaatacgaagccatttttaaagagtctttttctgaaaaaaatgagacctgctgggaagag
tatctttcacgcctcatcaaactgatcgagtcgaaaaaaaataagatggcatccataaga
aatcaggcacgtaatgaaattttggataactacagagagaacagggataaaaagatatac
attatagaagctcccaccggtattgggaaaaccttttctgctctgcaccttgcccttgaa
atctgtcgggataaaaacaaaaagagaattataaatgctttgcccatgacctccatcatt
gatcaaacatatgaagaatatggtctggtcatcaatgatgatgatttgcttaagtttcat
cacctgacacgctccaagagttatggcagctcggaaggagatgaaaaaaaagagacgaac
tctttgggccgtcagcaaaatgatttcatagccatgtcatggtcttcagacaaggttatc
gtgacgacattcaatcagctgttcaatgcattttattccaacaaaaacagggatctcata
aaattctggacacttcgggattcagttgtcatcctggatgaaattcaagctgtcccacga
attttaatccaggatctgatcaagacaattctctatctttcagaacattttaatatcgat
tttgttattatgtccgcaacgattccggcaatcaagaattttataccatctgaaaagata
gcagagcttcttgataaccgatatttttcaatggatttcaacaatagatattcattaaag
attgacactgatatcaatacgccagagtccctttggtcggcgataacgataaattatgaa
aacgtcaattctctgttatgtgttttaaatactaagaaattatccttagaaacgtataat
gaattggaacattctatcgactcttcagagctgttttttctcaataccaatttcattcca
aaacatagatctgagattataagaaatatcagaaatagattgaaaaacaaccagaaaacg
ctacttgtttcgacccaggtcgtggaggctggtgttgatcttgattttgattttggtatc
agagagtttgcacctctttacagtatgatccaaaccgctggccgtgttaacagagaaggg
acaaaaactggcgcagtgcttcaggtcacaaataagatcggtttcagcccataccatggg
aatgatttattaaaaaaagaagtttctgaattgtttcagtctcaaatggaagaaaatgaa
atcctgccgattcttaaaaaatattttcaaatggcaatagaaagaacccctccagatcct
attttgttatcccccatgaaggagttgaaatttcaaacggtacacaatctttttatagac
aattatatgaaagagattccaaaccttagttcagtctttattgaagttgaagttggtttg
tacagtcagttttattataaaatagagagcctttatgaagcgctaaaacatccaggtatc
tcccttgaagaaaaaatgaactacagaagcagattaaaaggtgtttttaaagaaatatcc
caatatgtcatcaacgtttccagagatgaagtcgttgatttgaaagatttttataaaaac
gttgaaatacaagtctgcccacatgaatttattggagataaaaaaaggtattctattaat
aagggttggttgggagaaaagagccttgatatccatttttaa

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