Desulforapulum autotrophicum: HRM2_06650
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Entry
HRM2_06650 CDS
T00861
Symbol
trmE
Name
(GenBank) TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
dat
Desulforapulum autotrophicum
Brite
KEGG Orthology (KO) [BR:
dat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dat03016
]
HRM2_06650 (trmE)
Transfer RNA biogenesis [BR:
dat03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
HRM2_06650 (trmE)
Prokaryotic type
Methyltransferases
HRM2_06650 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
Roc
GTP_EFTU
RsgA_GTPase
Ras
AAA_35
PduV-EutP
MMR_HSR1_Xtn
AAA_22
Arf
AAA_18
AAA_28
Motif
Other DBs
NCBI-ProteinID:
ACN13779
UniProt:
C0QIY9
LinkDB
All DBs
Position
complement(745548..746945)
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AA seq
465 aa
AA seq
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MKPDTIAAIATPPGRGGIGIIRISGPKALGLVPRFFGTTPVGPSPDLTLVSHTMVHGYIF
DIKTGYVIDEVLLVTMEAPRSYTAEDVVEIQSHAGHLAMATILDQVVSAGARIAEPGEFT
KRAFLNGRIDLTQAEAVADIINARTAGALKIAAAQGTGELKDAIHGAREILIELLALLEA
AIDFPDETQDLVPSDQGIVRVKQVLTACEKFIQTYEEAHFLRDGIKLAICGPPNVGKSSL
MNRLLQKERSIVTELPGTTRDLIEETLNINGITFLVSDTAGMHQTDDLVERIGIERAKKH
IAASDLILFMKGADKEISESELQSIVPKDKKVILVINKIDLIEGKTAGSAGVEKSLPPTL
AQLPQVRISALKNTGIDHLRKTITRLSMENIGEASSVVPNLRHRTALKRAIKSLKTAEAG
FLNGQNEETLALDIRRAADLLGEITGNTAGIDILDTIFSNFCIGK
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccggataccatagccgccattgcgaccccgccgggaaggggcgggatcggaatc
atccggatatcgggtccgaaagctctgggccttgtgccccggtttttcggaacaaccccc
gtgggtccgtcacctgatctcaccctggtctcccacaccatggttcacggctatattttt
gacatcaaaaccggctatgtcattgacgaggtgctcctggtcaccatggaggcacccagg
tcctacacagccgaagatgttgtcgaaatccagtcccatgccggtcaccttgccatggcc
accattcttgaccaggtcgtgtcagccggcgccaggattgccgaacccggtgagtttaca
aaacgggcttttttaaacggccgcattgaccttacccaggccgaggccgtggctgacatc
attaatgccaggaccgccggcgcccttaaaattgccgcagcccagggaacgggggaatta
aaggatgccatccatggagcaagggaaatcctcatcgaacttctcgcccttctggaagca
gccattgactttcccgatgaaacccaggatctggttcccagtgaccagggaatcgtccgg
gtaaaacaggtgttgaccgcctgtgaaaagttcattcaaacctacgaagaggcccacttt
ctaagggacggcattaagcttgccatctgcggaccgcccaacgtgggaaaatcgagcctg
atgaaccgactccttcaaaaagagcggtccattgtcactgaacttcccggaaccacccgg
gatctcattgaagagaccctcaacatcaatggcatcacctttcttgtctcggacacggca
ggtatgcaccagaccgatgatctggtggaaagaatcggcattgaacgggccaaaaaacac
attgccgcttcagacctgatcctgttcatgaagggcgcagacaaggaaatttccgaaagc
gagcttcagtccattgttcccaaggataaaaaggtgatcctggtcatcaacaagatcgat
ctaattgagggaaaaacagcaggcagtgcaggggttgaaaaaagccttccccctaccctt
gcccaacttccccaggtgaggatttccgcccttaagaacacgggaattgatcatcttcgc
aaaaccatcaccagactctccatggaaaacattggagaggcctcgtcggtggtgcccaac
ctgagacacagaacggcccttaaacgggccatcaagagcttgaaaaccgcagaagcaggc
tttttgaacggccagaatgaagaaaccctcgcccttgacatcagaagggccgccgatctc
ctgggtgagatcaccggcaacaccgcgggcatcgacatccttgacaccatcttcagcaac
ttctgcataggaaaatag
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