Desulforapulum autotrophicum: HRM2_06710
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Entry
HRM2_06710 CDS
T00861
Symbol
rne1
Name
(GenBank) Rne1
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
dat
Desulforapulum autotrophicum
Brite
KEGG Orthology (KO) [BR:
dat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dat03019
]
HRM2_06710 (rne1)
03009 Ribosome biogenesis [BR:
dat03009
]
HRM2_06710 (rne1)
Messenger RNA biogenesis [BR:
dat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HRM2_06710 (rne1)
Ribosome biogenesis [BR:
dat03009
]
Prokaryotic type
rRNA processing factors
HRM2_06710 (rne1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
YqaH
eIF-1a
Motif
Other DBs
NCBI-ProteinID:
ACN13785
UniProt:
C0QIZ5
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All DBs
Position
complement(750745..752304)
Genome browser
AA seq
519 aa
AA seq
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MLKELVVNAAEHETRVALLENGTIAELFIEQDDESNITGNIYKGKIQRVLPGMQAAFVDI
GLAQAAFLYVDDIYDETSQELARRFEQESDADPNDPDLKPVDDTPIPMEWKPSFTTEASI
EDLVTEGQEILVQISKSPIGTKGPRVTAHISLPGRFMVLMPTVDHVGISKRITADSERTR
LKELLTSVRQDNFGYIFRTAAQGIDEQRLKKEIAFLTKTWESIQKKNKTSAAPTLLYRDL
TVTFRAVRDLLTDEADKLVIDSKIGYESVLSFLDKLMPDIHVSVELYQGKEPIFDAYNIE
GDITRALKKKVWLKSGGYIIIDPTEALVAIDVNTGRYVGKHNFDETILKTNLEAVKEIAY
QIRLRNIGGIIIIDFIDMKRTQHKEKVMNLLIETLKRDKAQTNVLPLSELGLVQMTRKRV
RKNLTRTLCEPCFYCGGDGMLLSKRSICYKIHRDLMSEANDIMGNMFTVKVHPEIAQLLH
GEQEHLIISLEREIRRPITIYPDPQYHIEEYHIFETLAK
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaagagctcgttgtaaatgccgcagaacatgaaacccgggtagccctccttgag
aacggcaccattgctgaacttttcatcgaacaggacgacgagtccaatatcacgggtaac
atatacaagggaaaaatccagcgggtgctgccgggaatgcaggcggcatttgtagacatc
gggcttgcccaggctgcctttctctacgtggacgacatatacgacgagaccagccaggag
cttgcccgccggtttgaacaggaaagtgatgccgaccccaatgatccggatctgaagccc
gtggacgacactccgattcccatggagtggaaaccatcgttcacaaccgaggcaagcatc
gaagatcttgtgaccgagggccaggaaatcctggtgcagatctcaaaatcccccatcggc
accaagggcccacgggtgacggcccacatctcgctgcctggtcgattcatggtactcatg
cccacggtggaccatgtgggtatatccaaacgaataacggcagattctgagcggacaaga
ctcaaggagctgctgaccagcgttcgccaggacaacttcggctacatcttcagaaccgca
gcccagggcatcgatgagcagcgcctgaaaaaagagatcgcctttctcacaaaaacctgg
gaaagcatccagaaaaagaacaagacctcggcagcgccgaccctgctctaccgggatctc
accgtgaccttcagggccgttcgggatcttttgacggacgaggctgacaagcttgtcatt
gattcaaaaatcggctatgaaagcgtgctgtcttttctggacaaactcatgcccgacatt
cacgtttccgtggaactctaccagggcaaggagcccatatttgacgcctacaacattgag
ggagatattaccagggcattaaaaaaaaaggtgtggctcaaatccgggggttacatcatc
atcgaccccaccgaagccctggtggccattgatgttaacacgggccgatacgtgggcaaa
cacaactttgacgagaccatcctaaagaccaacctcgaggcggtcaaggaaattgcctac
cagatccgactgagaaacatcggtggcatcatcatcatcgactttattgacatgaagcgt
acacagcacaaggaaaaggtgatgaaccttctcattgagaccctgaagcgggacaaggcc
cagaccaatgtactgcccctgagcgaactgggcctggttcagatgacaaggaaaagggta
agaaaaaacctcacccgtaccctttgtgaaccctgtttctactgcggcggagacggtatg
ctcctgtccaaaaggtccatctgttacaagattcatcgggatctgatgagtgaggccaac
gacatcatgggcaatatgttcaccgtcaaggttcaccctgaaattgcccagttgctccac
ggagaacaggaacatttaatcatttcccttgagcgggagatcaggcggcccatcaccatt
tatcccgacccccaataccacattgaggagtaccacatttttgaaaccctggcaaaataa
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