Entry |
|
Symbol |
polA
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Name |
|
KO |
|
Organism |
dat Desulforapulum autotrophicum
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Pathway |
|
Brite |
KEGG Orthology (KO) [BR:dat00001]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HRM2_12370 (polA)
03410 Base excision repair
HRM2_12370 (polA)
03420 Nucleotide excision repair
HRM2_12370 (polA)
03440 Homologous recombination
HRM2_12370 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:dat03032]
HRM2_12370 (polA)
03400 DNA repair and recombination proteins [BR:dat03400]
HRM2_12370 (polA)
Enzymes [BR:dat01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HRM2_12370 (polA)
DNA replication proteins [BR:dat03032]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HRM2_12370 (polA)
DNA repair and recombination proteins [BR:dat03400]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
HRM2_12370 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HRM2_12370 (polA)
|
SSDB |
|
Motif |
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Other DBs |
|
LinkDB |
|
Position |
complement(1399422..1402097)
|
AA seq |
891 aa
MKQNIYLVDGSAYLYRAFHAIRSLSTSTGIPTNATFGFTRILLKLIKEKQPEYVAVFFDV
KGPTFRNAMFDAYKANRPPMPDDLRLQIPYIKEVVKALNIPIVEKTGFEADDLIGTYARL
AEEKGFAVVMVTGDKDFMQLVTDNAVIWDPMKEEIIDKRAISDKLGLTPIQVIDMLGLAG
DTADNIPGVPGVGPKTAQKLIAEHGNMKTIYDNLESLKSKKSLYAKLTDNRDQAFLSRDL
VTIDRNVAVEIPLDEFILSPFDHGRLAEIFKELEFTKLYQEFKPTQAPAEKEYILVTGLD
QLKKLIETFKQADILSVDTETTSKHPMLAKLVGISFAVEPHRAYYIPVGHTGMDAKKQPD
LSRVIALIRPLLENPEVKKVGQNIKYDYIVLTRHGIRMQGLGFDTMIASHLLNPSQRGHS
LDKIAMDLLDHKTIRYKEVTGSGKTQIGFNEVEIQTALDYAAEDADITLLCHGILKQKLQ
ESNLLDLMNQVEMPLITVLADMEMHGIKVDRKKLGELSKTFEQEMMTLETQIYALAGETF
NINSSQQLGTILFEKLQLPAKKKTKKKTGYSTDVEVLNELAEHHELPEKILRYRSLGKLK
STYSDALQELIHPETGRIHTSFNQAITATGRLSSSDPNLQNIPIRTNEGKMIREAFVPEP
GHILVAADYSQIELRLLAHFAEDEILIQSFRNDEDIHTRTAAEVFQAFPEFITEDLRRQA
KAINFGIMYGMSAFKLAKEINVTRKTAQTYIDSYFARYAGVKRFIDKTIEQAKTTGEVTT
ILGRKRRLNDINASNVNLRKLAERAAINTPVQGSAADLIKLAMINMDRELKKTPLKSRML
LSVHDEIIFETPLAEKEALMDLARQVMEGVFALKVPLKVNIAAGINWARAH |
NT seq |
2676 nt +upstreamnt +downstreamnt
atgaaacaaaacatataccttgttgatggaagcgcctatctttaccgtgccttccacgcc
atacgaagcctgtctacatccacgggcatccccacaaatgccacctttggattcacaaga
attctcctgaaattgatcaaggagaaacagcctgaatacgtggccgtattttttgatgtg
aaggggcccacctttcgcaatgccatgtttgacgcatacaaggccaaccgaccgccaatg
cccgatgacctgaggctgcaaattccctatatcaaggaggttgtcaaggccctgaacatt
cccattgtggagaagaccgggtttgaggcagacgacctcatcggcacctatgcccgactg
gcggaagagaagggattcgccgtggtcatggtaacaggggacaaggatttcatgcaactt
gtaacggacaatgccgtgatctgggaccccatgaaagaagagatcatcgacaaacgagcg
atttcggacaagctgggactgacccccatccaggtgatcgacatgttaggccttgccgga
gacaccgctgacaacatcccgggcgttccaggggtcggtcccaaaacggcccagaagctc
attgctgaacatggaaacatgaaaaccatctatgataacctggaaagcctgaaatccaaa
aaaagcctgtatgcaaaacttaccgacaaccgggaccaggcattcctgagccgggacctg
gttaccattgacagaaacgttgccgttgaaatccccctggacgaattcatcctctcgccc
tttgaccacgggcggctggcagaaatcttcaaggaacttgagtttacaaagctctaccag
gagttcaagcccacacaggcgcctgcagaaaaagagtatatccttgtaacagggctggat
caattaaagaaactgatagagacctttaaacaggcagacattctgagtgttgatacggaa
accacttcaaaacacccaatgctggccaaacttgtgggtatctcctttgccgtggagccc
cacagggcctattatatccccgtgggccacacgggaatggacgccaagaaacagcctgat
ttatcccgggtgattgccctaatacgtccccttcttgaaaaccccgaagttaaaaaggtc
ggccagaacatcaagtacgactacattgtgcttactcgccacggcatcagaatgcagggt
ctcgggtttgacaccatgatcgcctcccacctgttaaacccatcccaaaggggccacagc
ctggacaaaattgccatggaccttctggaccataaaaccatccgctacaaggaggtaacg
ggcagtggcaagacccagatcggatttaacgaggttgagatccaaacggccctggactat
gcagcagaagatgcggatataacccttctctgccatggaatccttaagcaaaagcttcag
gagagcaaccttctggacctgatgaaccaggtggagatgccccttatcactgtccttgca
gatatggaaatgcacggcatcaaggtggaccgaaaaaaactcggggagctttcaaaaacc
tttgaacaggagatgatgacccttgagacacaaatttacgcccttgcaggcgaaactttt
aacatcaactcgtcacaacaactcggcactattctgtttgaaaaactgcaactgcctgcc
aagaaaaaaaccaagaaaaaaaccggttattcaacagatgtggaggtgctcaatgaactg
gcagaacaccatgaactgccggaaaagatcctgagataccgctcccttggaaaacttaaa
tccacctattcagacgccctccaggaacttatccatccagagacgggcagaatccacacc
tcgttcaaccaggccatcacagcaacgggcaggctctcaagctcggaccccaaccttcag
aacatccccatccgtacgaacgaaggtaaaatgatcagagaggccttcgttcccgaaccg
ggccacatccttgttgcggccgactactcccagattgaactcaggctccttgcccacttt
gccgaggacgaaatcctgattcagtcgtttagaaacgacgaagatatccatacaagaacg
gcggccgaggtgttccaggcatttcccgagttcatcaccgaggatttaaggcgccaggca
aaggccatcaactttggtatcatgtacggaatgagcgcctttaaacttgcaaaggagatc
aacgtcacacggaaaacagcccagacctatattgattcctactttgcaaggtatgcaggg
gtaaaaagattcattgacaaaaccatcgaacaggcaaaaacaaccggagaggtgacaacc
attcttggcaggaaaaggcggctcaacgacatcaacgcctccaacgtgaacctaaggaaa
cttgccgaaagggccgccattaacacgccggttcagggcagtgccgcagatctgatcaag
cttgccatgatcaacatggacagggaactaaaaaaaacaccgctaaaatcacggatgctc
ctgtccgtccacgatgaaattatctttgaaacgcccctggcggaaaaagaggccctcatg
gatcttgcccgacaggtcatggaaggggtgtttgccctcaaggtacccttgaaggtcaac
atagcggcaggaataaactgggccagggcccattaa |