Desulforapulum autotrophicum: HRM2_12370
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Entry
HRM2_12370 CDS
T00861
Symbol
polA
Name
(GenBank) PolA
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
dat
Desulforapulum autotrophicum
Pathway
dat03030
DNA replication
dat03410
Base excision repair
dat03420
Nucleotide excision repair
dat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HRM2_12370 (polA)
03410 Base excision repair
HRM2_12370 (polA)
03420 Nucleotide excision repair
HRM2_12370 (polA)
03440 Homologous recombination
HRM2_12370 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dat03032
]
HRM2_12370 (polA)
03400 DNA repair and recombination proteins [BR:
dat03400
]
HRM2_12370 (polA)
Enzymes [BR:
dat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HRM2_12370 (polA)
DNA replication proteins [BR:
dat03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HRM2_12370 (polA)
DNA repair and recombination proteins [BR:
dat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
HRM2_12370 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HRM2_12370 (polA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
HHH
DNA_pol_lambd_f
RecR_HhH
HTH_11
Motif
Other DBs
NCBI-ProteinID:
ACN14349
UniProt:
C0QM43
LinkDB
All DBs
Position
complement(1399422..1402097)
Genome browser
AA seq
891 aa
AA seq
DB search
MKQNIYLVDGSAYLYRAFHAIRSLSTSTGIPTNATFGFTRILLKLIKEKQPEYVAVFFDV
KGPTFRNAMFDAYKANRPPMPDDLRLQIPYIKEVVKALNIPIVEKTGFEADDLIGTYARL
AEEKGFAVVMVTGDKDFMQLVTDNAVIWDPMKEEIIDKRAISDKLGLTPIQVIDMLGLAG
DTADNIPGVPGVGPKTAQKLIAEHGNMKTIYDNLESLKSKKSLYAKLTDNRDQAFLSRDL
VTIDRNVAVEIPLDEFILSPFDHGRLAEIFKELEFTKLYQEFKPTQAPAEKEYILVTGLD
QLKKLIETFKQADILSVDTETTSKHPMLAKLVGISFAVEPHRAYYIPVGHTGMDAKKQPD
LSRVIALIRPLLENPEVKKVGQNIKYDYIVLTRHGIRMQGLGFDTMIASHLLNPSQRGHS
LDKIAMDLLDHKTIRYKEVTGSGKTQIGFNEVEIQTALDYAAEDADITLLCHGILKQKLQ
ESNLLDLMNQVEMPLITVLADMEMHGIKVDRKKLGELSKTFEQEMMTLETQIYALAGETF
NINSSQQLGTILFEKLQLPAKKKTKKKTGYSTDVEVLNELAEHHELPEKILRYRSLGKLK
STYSDALQELIHPETGRIHTSFNQAITATGRLSSSDPNLQNIPIRTNEGKMIREAFVPEP
GHILVAADYSQIELRLLAHFAEDEILIQSFRNDEDIHTRTAAEVFQAFPEFITEDLRRQA
KAINFGIMYGMSAFKLAKEINVTRKTAQTYIDSYFARYAGVKRFIDKTIEQAKTTGEVTT
ILGRKRRLNDINASNVNLRKLAERAAINTPVQGSAADLIKLAMINMDRELKKTPLKSRML
LSVHDEIIFETPLAEKEALMDLARQVMEGVFALKVPLKVNIAAGINWARAH
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaaaacatataccttgttgatggaagcgcctatctttaccgtgccttccacgcc
atacgaagcctgtctacatccacgggcatccccacaaatgccacctttggattcacaaga
attctcctgaaattgatcaaggagaaacagcctgaatacgtggccgtattttttgatgtg
aaggggcccacctttcgcaatgccatgtttgacgcatacaaggccaaccgaccgccaatg
cccgatgacctgaggctgcaaattccctatatcaaggaggttgtcaaggccctgaacatt
cccattgtggagaagaccgggtttgaggcagacgacctcatcggcacctatgcccgactg
gcggaagagaagggattcgccgtggtcatggtaacaggggacaaggatttcatgcaactt
gtaacggacaatgccgtgatctgggaccccatgaaagaagagatcatcgacaaacgagcg
atttcggacaagctgggactgacccccatccaggtgatcgacatgttaggccttgccgga
gacaccgctgacaacatcccgggcgttccaggggtcggtcccaaaacggcccagaagctc
attgctgaacatggaaacatgaaaaccatctatgataacctggaaagcctgaaatccaaa
aaaagcctgtatgcaaaacttaccgacaaccgggaccaggcattcctgagccgggacctg
gttaccattgacagaaacgttgccgttgaaatccccctggacgaattcatcctctcgccc
tttgaccacgggcggctggcagaaatcttcaaggaacttgagtttacaaagctctaccag
gagttcaagcccacacaggcgcctgcagaaaaagagtatatccttgtaacagggctggat
caattaaagaaactgatagagacctttaaacaggcagacattctgagtgttgatacggaa
accacttcaaaacacccaatgctggccaaacttgtgggtatctcctttgccgtggagccc
cacagggcctattatatccccgtgggccacacgggaatggacgccaagaaacagcctgat
ttatcccgggtgattgccctaatacgtccccttcttgaaaaccccgaagttaaaaaggtc
ggccagaacatcaagtacgactacattgtgcttactcgccacggcatcagaatgcagggt
ctcgggtttgacaccatgatcgcctcccacctgttaaacccatcccaaaggggccacagc
ctggacaaaattgccatggaccttctggaccataaaaccatccgctacaaggaggtaacg
ggcagtggcaagacccagatcggatttaacgaggttgagatccaaacggccctggactat
gcagcagaagatgcggatataacccttctctgccatggaatccttaagcaaaagcttcag
gagagcaaccttctggacctgatgaaccaggtggagatgccccttatcactgtccttgca
gatatggaaatgcacggcatcaaggtggaccgaaaaaaactcggggagctttcaaaaacc
tttgaacaggagatgatgacccttgagacacaaatttacgcccttgcaggcgaaactttt
aacatcaactcgtcacaacaactcggcactattctgtttgaaaaactgcaactgcctgcc
aagaaaaaaaccaagaaaaaaaccggttattcaacagatgtggaggtgctcaatgaactg
gcagaacaccatgaactgccggaaaagatcctgagataccgctcccttggaaaacttaaa
tccacctattcagacgccctccaggaacttatccatccagagacgggcagaatccacacc
tcgttcaaccaggccatcacagcaacgggcaggctctcaagctcggaccccaaccttcag
aacatccccatccgtacgaacgaaggtaaaatgatcagagaggccttcgttcccgaaccg
ggccacatccttgttgcggccgactactcccagattgaactcaggctccttgcccacttt
gccgaggacgaaatcctgattcagtcgtttagaaacgacgaagatatccatacaagaacg
gcggccgaggtgttccaggcatttcccgagttcatcaccgaggatttaaggcgccaggca
aaggccatcaactttggtatcatgtacggaatgagcgcctttaaacttgcaaaggagatc
aacgtcacacggaaaacagcccagacctatattgattcctactttgcaaggtatgcaggg
gtaaaaagattcattgacaaaaccatcgaacaggcaaaaacaaccggagaggtgacaacc
attcttggcaggaaaaggcggctcaacgacatcaacgcctccaacgtgaacctaaggaaa
cttgccgaaagggccgccattaacacgccggttcagggcagtgccgcagatctgatcaag
cttgccatgatcaacatggacagggaactaaaaaaaacaccgctaaaatcacggatgctc
ctgtccgtccacgatgaaattatctttgaaacgcccctggcggaaaaagaggccctcatg
gatcttgcccgacaggtcatggaaggggtgtttgccctcaaggtacccttgaaggtcaac
atagcggcaggaataaactgggccagggcccattaa
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