Desulforapulum autotrophicum: HRM2_12930
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Entry
HRM2_12930 CDS
T00861
Symbol
appB
Name
(GenBank) AppB
KO
K02033
peptide/nickel transport system permease protein
Organism
dat
Desulforapulum autotrophicum
Pathway
dat02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dat00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HRM2_12930 (appB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dat02000
]
HRM2_12930 (appB)
Transporters [BR:
dat02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
HRM2_12930 (appB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
BPD_transp_1_N
Motif
Other DBs
NCBI-ProteinID:
ACN14404
UniProt:
C0Q8R4
LinkDB
All DBs
Position
complement(1463558..1464475)
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AA seq
305 aa
AA seq
DB search
MLIYTLKRLGLALLVTVTVSLISFMLLRVSGDPAISLAGEGASNEEIEFVRAEYGFDRPI
IIQYFEWAGRAIQGDFGKSPYLNQPVSHMLKERMGVTLILGLCSLTFALVLSVPLGILAA
TRPNTWIDRIALTISVMGQAMPSFWFGLILIIFFGVKLRWLPISGSDTWQHFVLPTIALG
YYATPAIMRLVRSGMLEVLASDHIRTARAKGLKWPKILFKHALRNAIIPVVALAAVQLGF
MLGGSIVIESIFALNGLGNLAWVSIARSDLPVVQAIVLFLSTTYIFLTFLGDLLNAFLDP
RIRSN
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgctcatttacacattaaaacgcctgggccttgccctgctggtgaccgtcaccgtttcc
ctgatcagcttcatgctgctgcgggtgtcaggagatccggccatctccctggcaggggaa
ggggccagcaatgaagaaattgagtttgtccgggccgaatacggatttgaccgacccatt
atcatccagtactttgagtgggccggccgggcgatccagggggatttcggcaaatccccc
tacctgaaccagcccgtatcccatatgctcaaggagcgcatgggcgtcaccctgatcctg
ggcctgtgctccctgacctttgccctggtgttgtcagtccctttgggcatactggcagcc
acccgacccaacacctggatcgaccgcattgccctgaccatatcggtcatgggccaggcc
atgccttcgttctggttcggcctgatcctgatcatctttttcggggtaaagctgcgatgg
ctccccatttccggttccgacacctggcaacactttgtcctgcccaccattgccctgggg
tactatgcaacccctgccatcatgcgcctggtccggtccggcatgctggaggtcctggcc
tctgaccatatccggaccgcccgggccaaggggctgaaatggcccaaaattttattcaag
cacgccctgaggaacgccatcatacccgtggtggccctggcagcggttcagctggggttc
atgcttggcggctccattgtcattgagtcgatctttgccctcaacggcctgggcaacctg
gcatgggtatccattgcccggtctgacctgcccgtggtccaggccattgttctttttctt
tccaccacctatatttttcttacctttctgggggatctgctcaacgcatttttagatccc
agaatcaggagcaattaa
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