Desulforapulum autotrophicum: HRM2_13680
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Entry
HRM2_13680 CDS
T00861
Symbol
fadD3
Name
(GenBank) FadD3
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
dat
Desulforapulum autotrophicum
Pathway
dat00061
Fatty acid biosynthesis
dat00071
Fatty acid degradation
dat01100
Metabolic pathways
dat01212
Fatty acid metabolism
dat02024
Quorum sensing
dat04146
Peroxisome
Module
dat_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
dat00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
HRM2_13680 (fadD3)
00071 Fatty acid degradation
HRM2_13680 (fadD3)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
HRM2_13680 (fadD3)
09145 Cellular community - prokaryotes
02024 Quorum sensing
HRM2_13680 (fadD3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
dat01004
]
HRM2_13680 (fadD3)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dat04147
]
HRM2_13680 (fadD3)
Enzymes [BR:
dat01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
HRM2_13680 (fadD3)
Lipid biosynthesis proteins [BR:
dat01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
HRM2_13680 (fadD3)
Exosome [BR:
dat04147
]
Exosomal proteins
Exosomal proteins of breast milk
HRM2_13680 (fadD3)
Exosomal proteins of breast cancer cells
HRM2_13680 (fadD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
ACN14477
UniProt:
C0Q8Y7
LinkDB
All DBs
Position
1555403..1557076
Genome browser
AA seq
557 aa
AA seq
DB search
MSEQGQSKEKVWINAYESGVPETIDFKEVLIPGYLEQSARDFPEKTALVFEGYKITFTEL
NDMVDTFVGVLRQLGIKKGNSVSILLPNLIPCVVAYYAILKMGAIAVMNNPLYSDRELLY
QFNDSGSTMVITLDLLVERMKALRAKTQIKNIIYASLGDYLPFAKRLLFPLVAKKRKLAT
DVQPGPDLYSFKELLDKNEPDRTGVEIDFDDVAMYQYTGGTTGVSKGVMLTHRNLSYQVQ
QIKAWFPTFRMGTDIMLGALPFFHVFGLSVSMNFAIAMGWANILVPKPQPEPLLEAISRF
KPTFAPLVPTMYIGMLNHPNIGTSDLTSIEGCFSGSAPLPVEIINDFEKMTGAVIVEGFG
LTESSPVTHVNPFQGTRKPGSIGLPLPNVECRIVSMDDGVTDVEQGKPGELFIRGPQVMK
GYLNRPDETRKTLTDDGWLHTGDVATMDADGYFYIVDRIKDMIISGGYNVYPRDIEEVLY
EHPKVQEACCVGIPHPKRGEAAKVFIVLKSGETATRDEILDFCSTRLAKYKWPVEVEIRS
DLPKSAVGKVLKKDLRK
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaacagggtcaatcaaaggaaaaggtatggattaacgcctatgagtcgggggtg
cctgaaaccattgattttaaagaggtgttgatccccgggtacctggaacaatcggcccgt
gattttcctgaaaaaacagccctggtttttgaaggatacaagataacatttacggaactc
aatgacatggttgatacctttgtgggcgttttacgtcagcttggcattaaaaagggcaat
agtgtcagtattcttcttcccaaccttattccctgtgtggttgcctactatgccattttg
aagatgggggccattgccgtaatgaacaatccgctctattcggacagggagcttttgtat
cagtttaacgattctggttcaaccatggtgataacccttgatctgctggtcgagagaatg
aaggcgctgcgggctaaaacgcaaataaaaaacatcatatacgcttcccttggtgattat
ctgccatttgcaaaacgcctcctttttcccctggtggccaagaaaagaaagcttgcaacg
gatgttcagccgggaccagatctttattcattcaaggagcttttggacaagaacgaaccg
gacagaacaggtgttgaaattgattttgacgatgttgccatgtaccagtacacaggggga
acaaccggggtttcaaagggcgtgatgctgacccacaggaacctgagctaccaggttcag
cagatcaaggcgtggtttcccacgttcaggatgggaacggacatcatgctcggagccctt
ccctttttccatgtgtttgggctctccgtctccatgaattttgccattgccatgggctgg
gccaatatccttgttcccaagccccagcctgaacccctgcttgaagcgatttcaaggttc
aaaccgacctttgcaccccttgtcccgaccatgtatatcggcatgcttaaccacccgaat
atcggcacaagcgatttgacgagtatcgagggctgtttttctggaagcgctccccttccc
gtggagattatcaacgattttgagaaaatgaccggggcggtcattgtggaaggattcggc
cttacagagtcttctcctgtgacccatgtcaatccctttcaggggacgaggaaacccggc
agtatcggtcttccgttacccaacgtggagtgcaggatcgtcagcatggacgatggcgtg
acagacgttgagcaaggcaaaccaggcgagctgttcatccggggcccccaggtgatgaag
gggtaccttaaccggcccgacgaaacccgaaaaaccctgaccgatgacggctggctccac
accggggatgtggcgaccatggatgcggatggctatttttacattgtggaccggatcaag
gatatgattatttctggcggttacaatgtctatccaagggatattgaagaggtgctttac
gagcatcccaaggttcaagaggcttgctgtgtcggcatcccccatcctaaaaggggggag
gcggccaaggtgttcatcgtgttaaagtctggcgaaaccgccactcgggatgaaatcctt
gatttttgttcaacaaggcttgcaaagtacaagtggcctgtggaggttgagatccggagt
gatcttcccaaatctgcggttggcaaggtcttgaaaaaagatctcagaaaatag
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