Desulforapulum autotrophicum: HRM2_22180
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Entry
HRM2_22180 CDS
T00861
Symbol
truA1
Name
(GenBank) TruA1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
dat
Desulforapulum autotrophicum
Brite
KEGG Orthology (KO) [BR:
dat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dat03016
]
HRM2_22180 (truA1)
Enzymes [BR:
dat01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
HRM2_22180 (truA1)
Transfer RNA biogenesis [BR:
dat03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HRM2_22180 (truA1)
Prokaryotic type
HRM2_22180 (truA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
CATSPERE_NTD1
Glyco_hydro_67N
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
ACN15316
UniProt:
C0QEH4
LinkDB
All DBs
Position
complement(2505065..2505805)
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AA seq
246 aa
AA seq
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MKTNFKLTLEYDGTPYSGWQVQNNCPTVQEEIEKALSRMLNQPIRISGSGRTDAGVHALG
QVANFQAATTIGAAQLKRSLNSLLKGPIVVHECRKVDQSFHSRYSARAKEYHYHFLNRED
PCGVGRNYVWHIRTPLSIPAMEECCPIITGTHDFKAFEGSGSPRSTTVRTLFSTGFERTA
EDRFTFKIKGDGFLRFMVRNIVGTLVLAGAGKITPENFKTILEGKDRGRAGATAPAKGLF
LVEVFY
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaaactttaagctcaccctggaatatgacgggacgccctattcgggctggcag
gtccagaacaactgcccaacggttcaggaagagattgaaaaagccctcagccggatgctt
aaccaacccatccggataagtgggtcaggcagaaccgacgccggggttcacgccctgggc
caggtggcaaatttccaggcggccaccaccattggggcagcacaactcaaacgaagcttg
aacagccttctcaagggtcccattgtggtgcatgaatgcaggaaggtggatcaaagtttt
cattcaagatacagtgccagggcaaaggagtaccactaccacttccttaacagggaggat
ccctgcggggttggccgcaactatgtgtggcacatccggacaccgctttcgattccggcc
atggaagagtgctgtccgatcataaccgggacccacgatttcaaggcgtttgaaggttct
ggaagcccgcgatcaaccacggtgaggactcttttttcaacaggatttgaacgaacagcc
gaagatcgtttcaccttcaaaatcaagggtgacggatttttgcgtttcatggtgagaaac
atcgtgggcacacttgtccttgcgggggctggaaaaattaccccggaaaatttcaagacg
atccttgaaggtaaagacaggggacgtgcaggggcgacagccccggcaaaggggcttttt
ctcgtggaggttttttattaa
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