Desulforapulum autotrophicum: HRM2_26600
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Entry
HRM2_26600 CDS
T00861
Symbol
trmA
Name
(GenBank) TrmA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
dat
Desulforapulum autotrophicum
Brite
KEGG Orthology (KO) [BR:
dat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dat03009
]
HRM2_26600 (trmA)
Enzymes [BR:
dat01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
HRM2_26600 (trmA)
Ribosome biogenesis [BR:
dat03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HRM2_26600 (trmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
Cons_hypoth95
TRM5-TYW2_MTfase
PCMT
TRAM
Methyltransf_11
PrmA
Methyltransf_15
UPF0020
TPMT
BpsA_C
RrnaAD
N6_N4_Mtase
Methyltransf_32
DOT1
Methyltransf_4
FtsJ
Ubie_methyltran
Motif
Other DBs
NCBI-ProteinID:
ACN15754
UniProt:
C0QI18
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All DBs
Position
complement(3035299..3036687)
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AA seq
462 aa
AA seq
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MKIQKRKPVELEIIDLAFGGKGLAKPDGYPIFVDRTVPGDRIIARITKKKKSYGEATLVS
LVTPSVLRQDPPCEYAAHCGGCRWQTLAYETQLEYKQRHVTESLEHIGLLKDVEVLPVIP
SRKIFGFRNKMEFSCTTSRWLMPEDLENPDIKKGFGLGLHVPGTFDRIIDIDKCLIQPDT
GNQIMQVVRQYIVESGVPAYGLRSHEGFWRFLMLRSSSAFNTWMVNIVTSEENDALLIPL
AEHLKNMFPSIVSIVNNVTAKKAGIATGDYEKLLAGEQFIREKLGRFTFEISANSFFQTN
TAGAEQLYSLVSEYADLTGNETVVDLYSGTGTIPIWLSDRAKKVVGIEIVESAVVDAKKN
AALNQIDNCEFFVGDIKDVLPQLDATCNVMIIDPPRVGMHKDVVAQVMAIAPKKIVYVSC
NPATLARDLGMLKERYRVVKVQPVDMFPHTFHIESVALLEAL
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgaagatacaaaagagaaagcccgttgaacttgaaattatcgatcttgcctttggtggc
aagggccttgccaaacctgacggctaccccatatttgtggatcgcaccgtgccgggtgac
aggatcattgccaggatcaccaaaaaaaagaaaagttatggtgaggcaacccttgtctcc
cttgtgacgccctcagtcctcaggcaggacccgccctgcgaatatgcggcccattgcggc
ggatgccggtggcagacccttgcctatgaaacccagcttgagtacaaacagcgccatgtg
actgaatcccttgagcacatcggtctgttaaaggatgttgaggtgctgcccgtgatcccc
tcccgaaagattttcgggttcagaaacaagatggaattttcctgcaccaccagtcgctgg
ctgatgccggaagatcttgaaaatcctgacattaaaaaggggtttggcctgggcctccat
gtgcctggaacctttgatcgcatcattgatattgacaaatgtctgatccagccggatacg
ggcaaccagatcatgcaggttgtgaggcaatatattgttgaatccggggtgccggcctac
ggccttcgttcccacgaggggttctggcgtttcctcatgctcagaagttcgtcggcattc
aatacctggatggtcaacattgttaccagtgaagagaacgacgcccttctgattcccctt
gccgaacaccttaaaaatatgtttccctcaattgtctccattgttaacaatgtcacggcc
aaaaaggccggtattgccacgggggattatgagaaactccttgcaggcgaacaatttatc
cgggaaaaacttggccggtttacctttgaaatttcagctaacagcttttttcagaccaat
accgctggtgcggaacagctttattccctggtctctgaatatgccgatctgacgggcaac
gaaaccgtggtggatctctattccggcacgggcaccattcccatctggttgtctgaccgg
gccaaaaaggttgtgggtattgaaattgtggagagcgccgttgttgatgctaaaaaaaat
gcagccctgaatcagatcgacaactgtgaattttttgtgggcgacatcaaagatgtgctg
ccccagctggatgccacctgcaacgtcatgatcattgatcccccaagggtggggatgcac
aaggatgtggtcgcccaggtcatggccattgcaccgaaaaaaattgtctatgtctcgtgc
aatcctgcaacccttgcaagggaccttggtatgctcaaggaacgctatcgggtagtcaag
gttcagcccgtggacatgtttccccacacctttcacatcgaatccgttgccctgcttgag
gccttgtag
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