Desulforapulum autotrophicum: HRM2_31020
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Entry
HRM2_31020 CDS
T00861
Symbol
ffh
Name
(GenBank) Ffh
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
dat
Desulforapulum autotrophicum
Pathway
dat02024
Quorum sensing
dat03060
Protein export
dat03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
dat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
HRM2_31020 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HRM2_31020 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HRM2_31020 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
dat02044
]
HRM2_31020 (ffh)
Enzymes [BR:
dat01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
HRM2_31020 (ffh)
Secretion system [BR:
dat02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
HRM2_31020 (ffh)
Eukaryotic Sec-SRP protein
HRM2_31020 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
AAA_22
nSTAND3
ResIII
AAA_31
APS_kinase
AAA_30
Zeta_toxin
AAA_16
6PF2K
AAA_33
AAA_24
Thymidylate_kin
NACHT
Motif
Other DBs
NCBI-ProteinID:
ACN16185
UniProt:
C0QKU5
LinkDB
All DBs
Position
complement(3519759..3521084)
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AA seq
441 aa
AA seq
DB search
MFDNLSDRLNATFKKLKGRGTLSEKAIDEGLKQVRMALLEADVNYRVAKKVISDIHRRAL
GQEVMESLTPGQQVIKIVYDEFSTMMGSAHEGLNLGNRVPETVMLVGLQGAGKTTTAGKL
ALYLKKQGKRPFLVPVDLHRPAAIDQLKKLGKQLGIPVFDSTQEMKLGDICRAAEKMAGQ
EGFDTLLVDTAGRLHVDDGLMAELVELKKMLNPVETLLVADAMTGQDAVNIAGAFDKAVD
LTGVILTKMDGDARGGAALSIKAVTGKPLKFIGVGEKSTGLEPFHPERMASRILGMGDTL
SLIEKAQESVDLKKAEALEKKLKKNQFTLEDFRDQMASVRSMGSIKDLMGLIPGVNKKMI
SGLNIDEREFVRIEAIINSMTPEERRSHAIIKGSRKKRIAKGSGSTVQDVNKLLKSYTQT
MKMVKKFNKGGMRSLKGMLPF
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacaacttgagtgatcggctgaatgctacgtttaagaaactgaaagggcgagga
accctttctgagaaggcaattgatgaggggcttaaacaggtccgcatggcacttcttgaa
gcagatgtaaattacagggttgcaaaaaaagttatttcagatatacataggcgagccctt
ggtcaggaggtgatggagagccttacccccggtcagcaggtgattaagattgtctatgac
gaattctccaccatgatggggtctgcccatgaggggttgaaccttggcaatcgggttcct
gaaacggtcatgcttgtggggttacagggtgcaggaaagacgaccacggcgggaaaactt
gccctttatttgaaaaaacaaggtaagcggccctttctggttcctgtggatcttcaccgg
cctgcggcaattgatcagctgaaaaagttgggaaaacagcttgggattcctgtgtttgac
tcaacccaggagatgaaacttggggatatctgccgggctgcagaaaaaatggccggccag
gaggggtttgacaccctgcttgtggatacggcaggacggctccatgtggatgatgggttg
atggcagagcttgtcgagcttaaaaaaatgctcaacccggttgagacgcttcttgtggcc
gatgcaatgaccggtcaggatgctgtcaacattgcaggtgcatttgacaaggcagtggat
cttaccggggtaatcctcaccaagatggatggtgatgcaaggggcggggccgccctttcc
atcaaagccgtcacaggtaaaccccttaagttcatcggtgtgggcgaaaaatccacggga
cttgagccctttcatcctgaacggatggcatccaggatccttggcatgggggacacactt
tccctcattgaaaaggcccaggaatcggttgatctgaaaaaggctgaggccctggagaag
aagttaaagaaaaatcagtttacccttgaagattttcgggatcagatggcttcggtccga
agcatggggtcgatcaaggatctgatggggcttattcccggagtcaacaagaaaatgatt
tcgggtttaaatattgacgaacgtgagtttgtgcggatagaggcaataatcaactccatg
acccctgaagagcgccggagccatgcgatcatcaagggaagcaggaaaaagagaattgca
aagggaagcgggtccacggttcaggatgtgaacaagcttcttaaaagttatacacagaca
atgaaaatggtcaaaaagttcaataaaggcggcatgcgttccctaaagggtatgcttccg
ttctaa
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