Desulforapulum autotrophicum: HRM2_35450
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Entry
HRM2_35450 CDS
T00861
Name
(GenBank) RNA helicase of the superfamily II
Organism
dat
Desulforapulum autotrophicum
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Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
DEAD
ResIII
AAA_22
DEXQc_Suv3
Helicase_C
AAA_16
AAA_30
AAA_19
nSTAND3
PhoH
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
ACN16610
UniProt:
C0Q9A5
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Position
4007842..4010070
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AA seq
742 aa
AA seq
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MKKQSNKGPDKPFGRNSRQGNGKKTSSIKTPMTMTPGADPELAKIFKKIGFPKPSPFVPD
SFQLEAVEAIESSDCLVTAPTGAGKTWIAETAARQYLERGQKIWYATPLKALTNSIYAQF
IRCFGRDKVGILTGDVKENPDAPLIIGTTEILRNQLYDAMHTGEDLGADFIILDEAHFLG
DPERGVVWEEIIIYLPVRIPILMLSATIGNTGLIAEWLTTIRGKECHVIQTTERPVPLFP
LFLNPTGVISPLIRQTTGKKKLTLHRGVAEYLKAKPRPQISLPGRLPDFSEILKVLDHFD
LLPAIFFLKSRSDCDQAIKSCTGEILAKDKRKRTQLALRIDELTASNRHLARHGQRQILE
HTAAASHHSGQLPGWKVVVETLMAEGLLNAMFATSTVAAGVNFPARSVVILNSDRFNGTE
FLPLTASEFQQMTGRAGRRGMDKIGFAVVIPGRFMDLNHGARMLTAPPLDVKSQIKINFS
MTLNLLLSHTPDKIRLLLDNSFASHMITQGKRGNYARKAFGAKLEHLWDHFMAHLEFLKQ
EAFVSEDDTLTPDGVWAAQLRMDAPLLVAQSLRLGLLPERDPVMLAAVMASFVSEKEFED
ESMERRMLPKRVIRQFLTLRKGLKPFASKLMELGFNAPFLYLQPASVMLAWAGGEPWEST
LKRTAFAEGDLARLILRTAENLRQLAGVKQAFPVIAATAFEAMDLILREPVVNATDGVED
EETDETDEEIGTENDKKNQLHP
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacaatccaataaagggccggacaaacccttcggccgaaattcacgccagggc
aacgggaaaaaaacgtccagcataaaaacgcccatgaccatgacacctggggcagacccg
gagcttgcaaaaatcttcaaaaaaatcggttttcccaagccgtccccctttgtgcccgat
tcgttccagcttgaggccgttgaggccatcgaatcttcagactgcctggtcacagccccc
accggggccggtaaaacctggatcgcagaaactgcagccaggcaataccttgaaaggggg
cagaaaatctggtacgctacccccctcaaagccctgaccaactccatctatgcccagttc
atacgatgcttcggccgggacaaggtgggcattttaaccggcgacgtaaaggaaaacccg
gacgcccccctgatcattggaaccacggaaatcctcagaaaccagctctacgatgccatg
cacacgggcgaggacctgggagcagacttcatcatccttgacgaggcccatttcctgggc
gatccagaacggggggtcgtgtgggaagagatcatcatctatctgccggtgagaatcccc
attctcatgctttcggcaaccatcggcaacacaggcctcattgccgaatggctgacaact
attcggggaaaagagtgccatgtcatccagacaaccgaacgtccggttcctctgtttcca
cttttcctgaaccccacgggggtcatctccccccttatcagacagactaccggcaaaaaa
aaactcaccctccacaggggcgttgccgaatatctcaaggccaaaccaagaccccagatc
agcctgcccggacggttgccggatttttccgaaatcctcaaggttctggaccactttgac
ctgcttccagcgatcttttttcttaaatccaggtccgactgcgaccaggcaatcaaaagc
tgcacgggcgaaatcctggcaaaggacaagcgaaaaaggactcagcttgccctgcgcata
gacgaacttacagcgtcaaaccgtcaccttgcccgccacgggcagcggcagatccttgaa
cacacggcagcggcctcccaccactcaggccaactgcccggctggaaggtggttgtcgag
accctgatggccgaagggctgctcaacgccatgtttgccacctcaaccgtggctgcgggg
gtgaactttccagcaaggagtgttgtcattctcaactccgaccgattcaacggcaccgag
ttcctgcccctgacagccagcgagttccagcagatgacaggcagggccggacgacgggga
atggacaaaattggatttgccgttgtcattcccggacgcttcatggatctcaaccatggg
gcaagaatgctgactgcccccccccttgatgtaaaaagccagatcaaaatcaatttttcc
atgaccctcaacctgctgctctcccacacccctgacaaaatacggctgctcctcgacaat
tcatttgcctcccacatgatcacccagggaaaacggggcaactacgccagaaaagccttt
ggcgccaaacttgaacatctctgggaccacttcatggcccaccttgaattcctcaagcag
gaggcgtttgtgtccgaggatgacaccctcacacccgatggcgtctgggcggcacagctt
cgcatggacgccccgctgctggtggcccagagcttaagactcggtcttcttccggaaagg
gaccctgtgatgcttgccgcggtcatggcttcttttgtcagcgaaaaagaatttgaagac
gaaagcatggaacgacgaatgctgcccaaacgggtgatacgacagtttctcaccctgaga
aagggactcaaaccctttgcctcaaaacttatggagctggggtttaatgcgccttttctc
tatcttcaaccggcatcggtcatgcttgcctgggccggtggagagccctgggaatccacc
ttgaaacgcaccgcctttgccgagggagaccttgccagactgatcctgagaaccgcagag
aacttaagacagcttgccggagtaaaacaggcctttcccgttattgcggcaaccgccttt
gaggcaatggaccttattctcagggaacccgtagtcaacgccacagacggggtggaagat
gaagaaactgatgaaactgatgaagaaattgggactgaaaatgataaaaaaaatcagcta
catccttga
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